RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RHPN2Q8IUC4 686 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 TTC17Q96AE7 1141 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 ZBTB10Q96DT7 871 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 ZFP69BQ9UJL9 534 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 BTAF1O14981 1849 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 RGL2O15211 777 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 KITP10721 976 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 PLEKHG4Q58EX7 1191 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 ANKRD22Q5VYY1 191 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 TDRD10Q5VZ19 366 aaKnown RBP21.56■■□□□ 1.04
SSBP3-216ENST00000610401 ASRGL1Q7L266 308 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 C12orf50Q8NA57 414 aaPredicted RBP21.56■■□□□ 1.04
SSBP3-216ENST00000610401 NAF1Q96HR8 494 aaKnown RBP21.56■■□□□ 1.04
SSBP3-216ENST00000610401 RANBP17Q9H2T7 1088 aaKnown RBP21.56■■□□□ 1.04
SSBP3-216ENST00000610401 KCND2Q9NZV8 630 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 TJP2Q9UDY2 1190 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 YDJCA8MPS7 323 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 F5H423 210 aaPredicted RBP21.56■■□□□ 1.04
SSBP3-216ENST00000610401 MAPK13O15264 365 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 PEX10O60683 326 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 BRD2P25440 801 aaKnown RBP21.56■■□□□ 1.04
SSBP3-216ENST00000610401 GPC3P51654 580 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 DLGAP5Q15398 846 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 THEMIS2Q5TEJ8 643 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 OTOAQ7RTW8 1153 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 MAML1Q92585 1016 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 APOBEC3GQ9HC16 384 aaKnown RBP21.56■■□□□ 1.04
SSBP3-216ENST00000610401 KIF1CO43896 1103 aaKnown RBP21.55■■□□□ 1.04
SSBP3-216ENST00000610401 WEE2P0C1S8 567 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 TUBP50607 506 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 RIPK1Q13546 671 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 LIN9Q5TKA1 542 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 MARCOQ9UEW3 520 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-216ENST00000610401 EXOC7Q9UPT5 735 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 ZNF862O60290 1169 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 ASMTLO95671 621 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 GDF10P55107 478 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 IRX4P78413 519 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 ALCAMQ13740 583 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 STAT4Q14765 748 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 ZNF568Q3ZCX4 644 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 GPD1LQ8N335 351 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 OR5B17Q8NGF7 314 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 GJD4Q96KN9 370 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-216ENST00000610401 CFAP57Q96MR6 1250 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 DENND2DQ9H6A0 471 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-216ENST00000610401 TXLNGQ9NUQ3 528 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 PCDHB2Q9Y5E7 798 aa21.55■■□□□ 1.04
SSBP3-216ENST00000610401 BASP1P80723 227 aaKnown RBP21.54■■□□□ 1.04
SSBP3-216ENST00000610401 MSS51Q4VC12 460 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 NLRP9Q7RTR0 991 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 NLRX1Q86UT6 975 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 EMC1Q8N766 993 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 SYTL5Q8TDW5 730 aaPredicted RBP21.54■■□□□ 1.04
SSBP3-216ENST00000610401 MORC4Q8TE76 937 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 C7orf43Q8WVR3 580 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 DNAH12Q6ZR08 3092 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 CCDC195A0A1B0GUA6 201 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 P4HA2O15460 535 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 MTA2O94776 668 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 CAP2P40123 477 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 C3orf62Q6ZUJ4 267 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 TTC7BQ86TV6 843 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 CCDC125Q86Z20 511 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 TARS2Q9BW92 718 aaKnown RBP21.54■■□□□ 1.04
SSBP3-216ENST00000610401 TCRBV7S3A2A0A539 114 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 MAP3K13O43283 966 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 T-ENOLP0DO92 83 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 ALDH3A1P30838 453 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 PSMC5P62195 406 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 MUM1Q2TAK8 710 aa21.54■■□□□ 1.04
SSBP3-216ENST00000610401 RBBP8NLQ8NC74 664 aaPredicted RBP21.54■■□□□ 1.04
SSBP3-216ENST00000610401 GTF2H1P32780 548 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 PRAMEF18Q5VWM3 479 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 B3GNT9Q6UX72 402 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 DSTYKQ6XUX3 929 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 CCHCR1Q8TD31 782 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 TCP10LQ8TDR4 215 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 PYROXD1Q8WU10 500 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 CHMP2BQ9UQN3 213 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 RIPK3Q9Y572 518 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 USH1CQ9Y6N9 552 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 ATAD5Q96QE3 1844 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 KLF1Q13351 362 aaPredicted RBP21.53■■□□□ 1.04
SSBP3-216ENST00000610401 MTMR2Q13614 643 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 CCNG2Q16589 344 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 ZNF75CPQ92670 426 aaPredicted RBP21.53■■□□□ 1.04
SSBP3-216ENST00000610401 PTPRN2Q92932 1015 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 RAB3IPQ96QF0 476 aaPredicted RBP21.53■■□□□ 1.04
SSBP3-216ENST00000610401 SERPINA10Q9UK55 444 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 NUB1Q9Y5A7 615 aa21.53■■□□□ 1.04
SSBP3-216ENST00000610401 AVILO75366 819 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 KHDC1Q4VXA5 237 aaKnown RBP21.52■■□□□ 1.04
SSBP3-216ENST00000610401 POLR3FQ9H1D9 316 aaPredicted RBP21.52■■□□□ 1.04
SSBP3-216ENST00000610401 ATP8B3O60423 1300 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 SPATA31A6Q5VVP1 1343 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 SPDYE5A6NIY4 337 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 PEX11AO75192 247 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 CD19P15391 556 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 PTDSS1P48651 473 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms