RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 ALDH1A3P47895 512 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 ME1P48163 572 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 CASP5P51878 434 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 EPHB3P54753 998 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 ASIC1P78348 528 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 TFAMQ00059 246 aaKnown RBP14.3□□□□□ -0.12
TOM1-218ENST00000608674 PFKPQ01813 784 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 GPR17Q13304 367 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 PLD1Q13393 1074 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 ATL3Q6DD88 541 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 CRELD2Q6UXH1 353 aaPredicted RBP14.3□□□□□ -0.12
TOM1-218ENST00000608674 NT5DC4Q86YG4 428 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 THEM5Q8N1Q8 247 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 LEMD2Q8NC56 503 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 CACTINQ8WUQ7 758 aaKnown RBP14.3□□□□□ -0.12
TOM1-218ENST00000608674 SHDQ96IW2 340 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 PYM1Q9BRP8 204 aaKnown RBP14.3□□□□□ -0.12
TOM1-218ENST00000608674 ASAH2Q9NR71 780 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 FAM86C1Q9NVL1 165 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 FAM13BQ9NYF5 915 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 RBAKQ9NYW8 714 aaPredicted RBP14.3□□□□□ -0.12
TOM1-218ENST00000608674 YIPF1Q9Y548 306 aa14.3□□□□□ -0.12
TOM1-218ENST00000608674 MICAL2O94851 1124 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 PRPF6O94906 941 aaKnown RBP14.29□□□□□ -0.12
TOM1-218ENST00000608674 MYL4P12829 197 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 PNPLA4P41247 253 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 DUSP4Q13115 394 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 E2F4Q16254 413 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 SV2CQ496J9 727 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 PHLDB3Q6NSJ2 640 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 BRSK2Q8IWQ3 736 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 TCEAL4Q96EI5 215 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 ZNF560Q96MR9 790 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 PHOX2BQ99453 314 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 TRIM9Q9C026 710 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 PCIF1Q9H4Z3 704 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 KBTBD4Q9NVX7 518 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 CEP72Q9P209 647 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 CFAP45Q9UL16 551 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
TOM1-218ENST00000608674 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
TOM1-218ENST00000608674 GOLGA8IPA6NC78 632 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 GOLGA8JA6NMD2 632 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 KPNA7A9QM74 516 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 KIAA0391O15091 583 aaKnown RBP14.28□□□□□ -0.12
TOM1-218ENST00000608674 POLR2DO15514 142 aaKnown RBP14.28□□□□□ -0.12
TOM1-218ENST00000608674 EXTL3O43909 919 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 ECI2O75521 394 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 CYP11A1P05108 521 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 SLC39A12Q504Y0 691 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 PRSS36Q5K4E3 855 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 CENPPQ6IPU0 288 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 SHC4Q6S5L8 630 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 EFCAB13Q8IY85 973 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 CCDC105Q8IYK2 499 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 HS6ST3Q8IZP7 471 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 DTWD2Q8NBA8 298 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 ATAD1Q8NBU5 361 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 CBWD1Q9BRT8 395 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 FGFBP2Q9BYJ0 223 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 SLITRK6Q9H5Y7 841 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 MAGEF1Q9HAY2 307 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 ZFP14Q9HCL3 533 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 SLC27A5Q9Y2P5 690 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 SIT1Q9Y3P8 196 aa14.28□□□□□ -0.12
TOM1-218ENST00000608674 MTMR11A4FU01 709 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 CCR2P41597 374 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 SNW1Q13573 536 aaKnown RBP14.27□□□□□ -0.13
TOM1-218ENST00000608674 SLC44A4Q53GD3 710 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 WSCD1Q658N2 575 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 TANGO2Q6ICL3 276 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 GPD1LQ8N335 351 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 ZSWIM2Q8NEG5 633 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 HPS3Q969F9 1004 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 ELSPBP1Q96BH3 223 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 TMEM209Q96SK2 561 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 PCDHA7Q9UN72 937 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 AGAP1Q9UPQ3 857 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 ASB3Q9Y575 518 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 PDCD11Q14690 1871 aaKnown RBP14.27□□□□□ -0.13
TOM1-218ENST00000608674 KMT2EQ8IZD2 1858 aa14.27□□□□□ -0.13
TOM1-218ENST00000608674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
TOM1-218ENST00000608674 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 EIF3DO15371 548 aaKnown RBP eCLIP14.26□□□□□ -0.13
TOM1-218ENST00000608674 VNN2O95498 520 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 ITGB3P05106 788 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 KRT19P08727 400 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 TMEM191BP0C7N4 346 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 POLR2BP30876 1174 aaKnown RBP14.26□□□□□ -0.13
TOM1-218ENST00000608674 TUFMP49411 452 aaKnown RBP14.26□□□□□ -0.13
TOM1-218ENST00000608674 EPHA5P54756 1037 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 PRKCQQ04759 706 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 SMARCB1Q12824 385 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 VEPH1Q14D04 833 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 MLF2Q15773 248 aaPredicted RBP14.26□□□□□ -0.13
TOM1-218ENST00000608674 TAF12Q16514 161 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 FAM78AQ5JUQ0 283 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 FAM26FQ5R3K3 315 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 CNNM4Q6P4Q7 775 aa14.26□□□□□ -0.13
TOM1-218ENST00000608674 ITIH5Q86UX2 942 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms