RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 SYN3O14994 580 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 TEX33O43247 280 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 P4HA1P13674 534 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 PON1P27169 355 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 GLUD2P49448 558 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 UBASH3AP57075 661 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 PLCB2Q00722 1185 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 KCNMA1Q12791 1236 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 RTP2Q5QGT7 225 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 WSCD1Q658N2 575 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 TRIM65Q6PJ69 517 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 TMC7Q7Z402 723 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 TOP6BLQ8N6T0 577 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 APPL2Q8NEU8 664 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 ZBP1Q9H171 429 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 SMYD3Q9H7B4 428 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 ENTPD7Q9NQZ7 604 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 TLR9Q9NR96 1032 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 L1RE1Q9UN81 338 aa23.19■■□□□ 1.3
NECAB3-221ENST00000607055 C2CD2LO14523 706 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 URODP06132 367 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 TYMPP19971 482 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 CA8P35219 290 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 ASPAP45381 313 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 RAP1GAPP47736 663 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 ERVFC1P60507 584 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 APBA1Q02410 837 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 SYCP1Q15431 976 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 SOWAHAQ2M3V2 549 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 METTL23Q86XA0 190 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 PDCL2Q8N4E4 241 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 AUTS2Q8WXX7 1259 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 RIN2Q8WYP3 895 aaPredicted RBP23.18■■□□□ 1.3
NECAB3-221ENST00000607055 PCMTD1Q96MG8 357 aaPredicted RBP23.18■■□□□ 1.3
NECAB3-221ENST00000607055 TCF25Q9BQ70 676 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 LSM14BQ9BX40 385 aaKnown RBP23.18■■□□□ 1.3
NECAB3-221ENST00000607055 PRDM12Q9H4Q4 367 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 CHST7Q9NS84 486 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 DSEQ9UL01 958 aa23.18■■□□□ 1.3
NECAB3-221ENST00000607055 LAMA2P24043 3122 aaKnown RBP23.18■■□□□ 1.3
NECAB3-221ENST00000607055 CTSAP10619 480 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 KLK7P49862 253 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 DSG1Q02413 1049 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 GRIN2CQ14957 1233 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 PTPN21Q16825 1174 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 VARS2Q5ST30 1063 aaKnown RBP23.17■■□□□ 1.3
NECAB3-221ENST00000607055 PLPP4Q5VZY2 271 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 PRSS55Q6UWB4 352 aaPredicted RBP23.17■■□□□ 1.3
NECAB3-221ENST00000607055 DPH6Q7L8W6 267 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 ARHGEF19Q8IW93 802 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 ADGRF2Q8IZF7 708 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 MICAL1Q8TDZ2 1067 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 FAM161BQ96MY7 647 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 SDCBP2Q9H190 292 aa23.17■■□□□ 1.3
NECAB3-221ENST00000607055 LAMA3Q16787 3333 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 CYP11A1P05108 521 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 WEE2P0C1S8 567 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 CDH8P55286 799 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 YWHAHQ04917 246 aaPredicted RBP23.16■■□□□ 1.3
NECAB3-221ENST00000607055 CAMK1Q14012 370 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 NR1I3Q14994 352 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 KIAA0319Q5VV43 1072 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 OVOS1Q6IE37 1185 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 PHLDB3Q6NSJ2 640 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 LIMS2Q7Z4I7 341 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 PPM1KQ8N3J5 372 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 MRPL45Q9BRJ2 306 aaKnown RBP23.16■■□□□ 1.3
NECAB3-221ENST00000607055 XPO4Q9C0E2 1151 aaKnown RBP23.16■■□□□ 1.3
NECAB3-221ENST00000607055 LMAN2LQ9H0V9 348 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 SIX2Q9NPC8 291 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 MRPL17Q9NRX2 175 aaKnown RBP23.16■■□□□ 1.3
NECAB3-221ENST00000607055 PCDHGC5Q9Y5F6 944 aa23.16■■□□□ 1.3
NECAB3-221ENST00000607055 COL4A4P53420 1690 aaPredicted RBP23.16■■□□□ 1.3
NECAB3-221ENST00000607055 CHD9Q3L8U1 2897 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 CBFA2T2O43439 604 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 LPXNO60711 386 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 SLC34A2O95436 690 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 CXCL14O95715 111 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 IRS1P35568 1242 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 CUL2Q13617 745 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 SMC1AQ14683 1233 aaKnown RBP23.15■■□□□ 1.3
NECAB3-221ENST00000607055 BMS1Q14692 1282 aaKnown RBP23.15■■□□□ 1.3
NECAB3-221ENST00000607055 PTPN14Q15678 1187 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 GJB7Q6PEY0 223 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 ANKS3Q6ZW76 656 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 RRAGAQ7L523 313 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 OSTM1Q86WC4 334 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 TMEM86AQ8N2M4 240 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 LNX1Q8TBB1 728 aaPredicted RBP23.15■■□□□ 1.3
NECAB3-221ENST00000607055 KBTBD7Q8WVZ9 684 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 PIK3R5Q8WYR1 880 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 ERGIC2Q96RQ1 377 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 ARID3AQ99856 593 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 BCO2Q9BYV7 579 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 APEX2Q9UBZ4 518 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 SIK3Q9Y2K2 1263 aa23.15■■□□□ 1.3
NECAB3-221ENST00000607055 VWA8A3KMH1 1905 aa23.14■■□□□ 1.3
NECAB3-221ENST00000607055 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.14■■□□□ 1.29
NECAB3-221ENST00000607055 H7C4K7 107 aa23.14■■□□□ 1.29
NECAB3-221ENST00000607055 FSCN2O14926 492 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms