RNA–Protein interactions for RNA: ENST00000606826.5

CSNK1A1-211, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-211ENST00000606826 CT83Q5H943 113 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 RABL3Q5HYI8 236 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 CT47A1Q5JQC4 288 aaPredicted RBP6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 PITRM1Q5JRX3 1037 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 COPS6Q7L5N1 327 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 RNF180Q86T96 592 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 THNSL2Q86YJ6 484 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 WDR63Q8IWG1 891 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 ZNF34Q8IZ26 560 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 SUPT20HQ8NEM7 779 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 RSAD2Q8WXG1 361 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 FAM193BQ96PV7 902 aaPredicted RBP6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 KCTD10Q9H3F6 313 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 NRDE2Q9H7Z3 1164 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 CHPF2Q9P2E5 772 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 TRMT112Q9UI30 125 aaKnown RBP6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 APOBEC2Q9Y235 224 aaKnown RBP6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 XDHP47989 1333 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 SH3TC1Q8TE82 1336 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 SBF1O95248 1867 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 FER1L6Q2WGJ9 1857 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 DICER1Q9UPY3 1922 aaKnown RBP6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 CACNA1FO60840 1977 aa6.38□□□□□ -1.39
CSNK1A1-211ENST00000606826 A0A1W2PR48 441 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 TLDC2A0PJX2 215 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 ZEB2O60315 1214 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 TOMM70O94826 608 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 NTSR2O95665 410 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 PEX11BO96011 259 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 LTA4HP09960 611 aaKnown RBP6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 ZNF853P0CG23 659 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 SOX5P35711 763 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 GZMKP49863 264 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 LGALS4P56470 323 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 WNT3AP56704 352 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 HLFQ16534 295 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 CRY2Q49AN0 593 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 DCAF17Q5H9S7 520 aaPredicted RBP6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 C1QL3Q5VWW1 255 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 FAM83AQ86UY5 434 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 JDP2Q8WYK2 163 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 CRAMP1Q96RY5 1269 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 TMPRSS11EQ9UL52 423 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 SORCS3Q9UPU3 1222 aa6.37□□□□□ -1.39
CSNK1A1-211ENST00000606826 GOLGB1Q14789 3259 aaKnown RBP6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 UBN2Q6ZU65 1347 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 GLTPD2A6NH11 291 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 DNAJC6O75061 913 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 HMGB1P09429 215 aaKnown RBP6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 GYPEP15421 78 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 VEGFAP15692 232 aaPredicted RBP6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 PTGS2P35354 604 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 SESN3P58005 492 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 FSTL1Q12841 308 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 UBE3CQ15386 1083 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 UGT8Q16880 541 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 LYSMD2Q8IV50 215 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 ZNF276Q8N554 614 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 GLB1L3Q8NCI6 653 aaPredicted RBP6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 CLRN3Q8NCR9 226 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 CPT1CQ8TCG5 803 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 SLC25A43Q8WUT9 341 aaPredicted RBP6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 EAF2Q96CJ1 260 aaPredicted RBP6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 PSMD1Q99460 953 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 ENKD1Q9H0I2 346 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 VPS33BQ9H267 617 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 PRDM12Q9H4Q4 367 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 SLITRK6Q9H5Y7 841 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 CAAP1Q9H8G2 361 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 TOPORSQ9NS56 1045 aaPredicted RBP6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 CDY2AQ9Y6F7 541 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 CCDC88AQ3V6T2 1871 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 LAMB2P55268 1798 aa6.36□□□□□ -1.39
CSNK1A1-211ENST00000606826 ABCC12Q96J65 1359 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 WDR33Q9C0J8 1336 aaKnown RBP6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 SLX4Q8IY92 1834 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 BBOX1O75936 387 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 CDK11BP21127 795 aaKnown RBP6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 MRPL49Q13405 166 aaKnown RBP6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 PDCD1Q15116 288 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 TWISTNBQ3B726 338 aaPredicted RBP6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 SLC10A5Q5PT55 438 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 SUSD4Q5VX71 490 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 SDE2Q6IQ49 451 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 GIMAP6Q6P9H5 292 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 HTR3DQ70Z44 454 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 FAM9BQ8IZU0 186 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 SYNE4Q8N205 404 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 AMER2Q8N7J2 671 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 CCDC191Q8NCU4 936 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 CHAC2Q8WUX2 184 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 LARP4BQ92615 738 aaKnown RBP6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 CHFRQ96EP1 664 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 ACAP3Q96P50 834 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 CDC5LQ99459 802 aaKnown RBP6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 CWC25Q9NXE8 425 aaPredicted RBP6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 EIF2B4Q9UI10 523 aaKnown RBP6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 EDARQ9UNE0 448 aa6.35□□□□□ -1.39
CSNK1A1-211ENST00000606826 WDR90Q96KV7 1748 aa6.34□□□□□ -1.39
CSNK1A1-211ENST00000606826 RECQL4O94761 1208 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms