RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 HSPBP1Q9NZL4 362 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 SOAT2O75908 522 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 LDHAP00338 332 aaKnown RBP13.28□□□□□ -0.28
CTSA-210ENST00000606000 LRG1P02750 347 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 RHOP08100 348 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 POU2F2P09086 479 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 ODC1P11926 461 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 CEBPBP17676 345 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 TYMPP19971 482 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 CMA1P23946 247 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 ELF1P32519 619 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 CYP2J2P51589 502 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 TWF1Q12792 350 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 HTR4Q13639 388 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 PARM1Q6UWI2 310 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 BMP8AQ7Z5Y6 402 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 NPAS3Q8IXF0 933 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 TCEAL8Q8IYN2 117 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 UBALD2Q8IYN6 164 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 RDH13Q8NBN7 331 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 KIAA0895Q8NCT3 520 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 OR5B17Q8NGF7 314 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 CXorf38Q8TB03 319 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 FGF13Q92913 245 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 FGF14Q92915 247 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 TCEAL4Q96EI5 215 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 CORO1BQ9BR76 489 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.28□□□□□ -0.283e-6■■□□□ 12.6
CTSA-210ENST00000606000 CEP72Q9P209 647 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 AFF4Q9UHB7 1163 aaKnown RBP13.28□□□□□ -0.28
CTSA-210ENST00000606000 DUSP12Q9UNI6 340 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 AGAP1Q9UPQ3 857 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 YIPF1Q9Y548 306 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.28□□□□□ -0.28
CTSA-210ENST00000606000 NUMBLQ9Y6R0 609 aa13.28□□□□□ -0.28
CTSA-210ENST00000606000 PVALEFA0A1B0GWK0 134 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 MTMR11A4FU01 709 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 CYB561D2O14569 222 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 HCRTO43612 131 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 CFHP08603 1231 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 CCR2P41597 374 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 POU5F1Q01860 360 aaKnown RBP13.27□□□□□ -0.29
CTSA-210ENST00000606000 STK4Q13043 487 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 KMT5BQ4FZB7 885 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 IER5LQ5T953 404 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 WSCD1Q658N2 575 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 TPGS2Q68CL5 300 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 SLC44A3Q8N4M1 653 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 FBXL6Q8N531 539 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 FSIP1Q8NA03 581 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 ATAD1Q8NBU5 361 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 IGSF9Q9P2J2 1179 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 SIX4Q9UIU6 781 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 CDH7Q9ULB5 785 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 SLC27A5Q9Y2P5 690 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 UBE4BO95155 1302 aa13.27□□□□□ -0.29
CTSA-210ENST00000606000 OR6C75A6NL08 312 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 KPNA7A9QM74 516 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 ANHXE9PGG2 379 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 CYP11A1P05108 521 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 KRT19P08727 400 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 TMEM191BP0C7N4 346 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 GJA1P17302 382 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 SYKP43405 635 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 BFSP1Q12934 665 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 DUSP4Q13115 394 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 GPR17Q13304 367 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 BECN1Q14457 450 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 CCDC142Q17RM4 750 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 BMT2Q1RMZ1 405 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 SV2CQ496J9 727 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 PRSS36Q5K4E3 855 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 NT5DC4Q86YG4 428 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 SUGP1Q8IWZ8 645 aaKnown RBP13.26□□□□□ -0.29
CTSA-210ENST00000606000 CSGALNACT2Q8N6G5 542 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 MCRS1Q96EZ8 462 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 MFSD14AQ96MC6 490 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 KXD1Q9BQD3 176 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 DNAJC25Q9H1X3 360 aa13.26□□□□□ -0.29
CTSA-210ENST00000606000 MRPS23Q9Y3D9 190 aaKnown RBP13.26□□□□□ -0.29
CTSA-210ENST00000606000 FAM237AA0A1B0GTK4 181 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 ZNF233A6NK53 670 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 MOSPD3O75425 235 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 PTPN2P17706 415 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 MYBPC2Q14324 1141 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 SNRNP35Q16560 246 aaKnown RBP13.25□□□□□ -0.29
CTSA-210ENST00000606000 SLC39A12Q504Y0 691 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 CWF19L1Q69YN2 538 aaKnown RBP13.25□□□□□ -0.29
CTSA-210ENST00000606000 CENPPQ6IPU0 288 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 LRRTM3Q86VH5 581 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 OSTM1Q86WC4 334 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 PDCL2Q8N4E4 241 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 PRSS33Q8NF86 280 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 PLEKHO2Q8TD55 490 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
CTSA-210ENST00000606000 ZCWPW1Q9H0M4 648 aa13.25□□□□□ -0.29
CTSA-210ENST00000606000 GZF1Q9H116 711 aaPredicted RBP13.25□□□□□ -0.29
CTSA-210ENST00000606000 EXOC1Q9NV70 894 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms