RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 HEG1Q9ULI3 1381 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PLEKHG1Q9ULL1 1385 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 DISP2A7MBM2 1401 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PTPRUQ92729 1446 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 KDM3BQ7LBC6 1761 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 CPS1P31327 1500 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCDC162PA2VCL2 907 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCDC169A6NNP5 214 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 NUDT19A8MXV4 375 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 M0R2C6 588 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF263O14978 683 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 RNF113AO15541 343 aaKnown RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 CEP104O60308 925 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PEX11AO75192 247 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 UBOX5O94941 541 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 UNC5CO95185 931 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 AGTP01019 485 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PF4P02776 101 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 ADRB1P08588 477 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 KRT16P08779 473 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PABPC4LP0CB38 370 aaKnown RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM200BP0CF97 657 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 HARSP12081 509 aaKnown RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZFXP17010 805 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 IFNAR1P17181 557 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 EIF2S2P20042 333 aaKnown RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMOD1P28289 359 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PCK1P35558 622 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 STAT6P42226 847 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 LIFRP42702 1097 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 SERPINB8P50452 374 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 RASSF2P50749 326 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 EIF4A1P60842 406 aaKnown RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 KCNJ2P63252 427 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 GUCY2DQ02846 1103 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 UBXN1Q04323 297 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PLP2Q04941 152 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PAK1Q13153 545 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 TRIM29Q14134 588 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 SPIDRQ14159 915 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 SAFBQ15424 915 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 ADRM1Q16186 407 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PTPN21Q16825 1174 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 KBTBD12Q3ZCT8 623 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 ODF2Q5BJF6 829 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 C10orf76Q5T2E6 689 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 SFMBT2Q5VUG0 894 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 TBC1D9BQ66K14 1250 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 OTUD7BQ6GQQ9 843 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 C3orf62Q6ZUJ4 267 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 SGMS1Q86VZ5 419 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 RAB11FIP4Q86YS3 637 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 NOSTRINQ8IVI9 506 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 ADSSL1Q8N142 457 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 USP38Q8NB14 1042 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 DAGLBQ8NCG7 672 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 LSM14AQ8ND56 463 aaKnown RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 NCOA7Q8NI08 942 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 DNAJC9Q8WXX5 260 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 DACT3Q96B18 629 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 DHTKD1Q96HY7 919 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCDC42Q96M95 316 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PWWP2AQ96N64 755 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 INPP4AQ96PE3 977 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 NOX5Q96PH1 765 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 TUBB6Q9BUF5 446 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 G6PC3Q9BUM1 346 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 CDADC1Q9BWV3 514 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 LRRC2Q9BYS8 371 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 XYLT2Q9H1B5 865 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 VPS16Q9H269 839 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 DPH5Q9H2P9 285 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 ADAM7Q9H2U9 754 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 SLITRK6Q9H5Y7 841 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 ECT2Q9H8V3 914 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PRDM16Q9HAZ2 1276 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 DDX21Q9NR30 783 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 GALNT8Q9NY28 637 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 MIS18AQ9NYP9 233 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 C9orf78Q9NZ63 289 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 AIPL1Q9NZN9 384 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 DBF4Q9UBU7 674 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 TTC7AQ9ULT0 858 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 SSX2IPQ9Y2D8 614 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 DIS3Q9Y2L1 958 aaKnown RBP4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 SIGLEC1Q9BZZ2 1709 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 FMN2Q9NZ56 1722 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 ATAD5Q96QE3 1844 aa4.37□□□□□ -1.71
HMGB1P50-201ENST00000605814 PEAK1Q9H792 1746 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 NWD2Q9ULI1 1742 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 KLF18A0A0U1RQI7 1052 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 SMIM31A0A1B0GVY4 71 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZC3H12DA2A288 527 aaKnown RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 WTIPA6NIX2 430 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 F8VZ95 297 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 GRM8O00222 908 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 MEIS1O00470 390 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAGEB2O15479 319 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CTNND1O60716 968 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms