RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 TLE6Q9H808 572 aa22.43■■□□□ 1.18
GRAMD1A-214ENST00000603907 TMEM8AQ9HCN3 771 aa22.43■■□□□ 1.18
GRAMD1A-214ENST00000603907 NGRNQ9NPE2 291 aaKnown RBP22.43■■□□□ 1.18
GRAMD1A-214ENST00000603907 SIX4Q9UIU6 781 aa22.43■■□□□ 1.18
GRAMD1A-214ENST00000603907 AGAP1Q9UPQ3 857 aa22.43■■□□□ 1.18
GRAMD1A-214ENST00000603907 NFE2L3Q9Y4A8 694 aa22.43■■□□□ 1.18
GRAMD1A-214ENST00000603907 KMT2EQ8IZD2 1858 aa22.43■■□□□ 1.18
GRAMD1A-214ENST00000603907 F8W810 466 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 SYN3O14994 580 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 GLP2RO95838 553 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 PRKCSHP14314 528 aaPredicted RBP22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 ATICP31939 592 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 LILRA4P59901 499 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 MYO1EQ12965 1108 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 BIRC3Q13489 604 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 USP41Q3LFD5 358 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 SV2CQ496J9 727 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 C15orf39Q6ZRI6 1047 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 SV2AQ7L0J3 742 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 TRIM59Q8IWR1 403 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 SUSD3Q96L08 255 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 CNOT6LQ96LI5 555 aaKnown RBP22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 GPR62Q9BZJ7 368 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 ZBP1Q9H171 429 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 CHST7Q9NS84 486 aa22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 MAGEC2Q9UBF1 373 aaPredicted RBP22.42■■□□□ 1.18
GRAMD1A-214ENST00000603907 PHACTR2O75167 634 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 STAU1O95793 577 aaKnown RBP22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 KRT19P08727 400 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 TRIM49P0CI25 452 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 TRIM49CP0CI26 452 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 CTSAP10619 480 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 SIGLEC14Q08ET2 396 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 TRPC3Q13507 836 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 DCAF17Q5H9S7 520 aaPredicted RBP22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 TCERG1LQ5VWI1 586 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 TDRD10Q5VZ19 366 aaKnown RBP22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 KRT39Q6A163 491 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 PDXDC1Q6P996 788 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 IRF2BP1Q8IU81 584 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 HASPINQ8TF76 798 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 SLC35C1Q96A29 364 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 RPGRIP1Q96KN7 1286 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 CDCA3Q99618 268 aaPredicted RBP22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 VN1R3Q9BXE9 311 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 IRAK3Q9Y616 596 aa22.41■■□□□ 1.18
GRAMD1A-214ENST00000603907 SMTNL1A8MU46 457 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 M0QZQ0 153 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 PPEF2O14830 753 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 FSCN2O14926 492 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 PMM2O15305 246 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 N4BP1O75113 896 aaKnown RBP22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 URODP06132 367 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 GCLMP48507 274 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 ZNF165P49910 485 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 MXI1P50539 228 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 DSG1Q02413 1049 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 PPP3CAQ08209 521 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 TMC7Q7Z402 723 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 APPL2Q8NEU8 664 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 TAF4BQ92750 862 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 TTPALQ9BTX7 342 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 IRF2BPLQ9H1B7 796 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 VRTNQ9H8Y1 702 aa22.4■■□□□ 1.18
GRAMD1A-214ENST00000603907 KPNA7A9QM74 516 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 P4HA2O15460 535 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 SRGAP2BP0DMP2 458 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 FGFR3P22607 806 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 EEF1GP26641 437 aaKnown RBP22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 BRCC3P46736 316 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 GLUD2P49448 558 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 CREMQ03060 361 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 TCF15Q12870 199 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 NCOA4Q13772 614 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 SMC1AQ14683 1233 aaKnown RBP22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 FAM171A1Q5VUB5 890 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 KIAA1841Q6NSI8 718 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 DSTYKQ6XUX3 929 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 HPDLQ96IR7 371 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 TCF25Q9BQ70 676 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 ENTPD7Q9NQZ7 604 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 MRPL17Q9NRX2 175 aaKnown RBP22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 GDAP2Q9NXN4 497 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 PCDHB8Q9UN66 801 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 PCDHGC5Q9Y5F6 944 aa22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.39■■□□□ 1.17
GRAMD1A-214ENST00000603907 CST3P01034 146 aaPredicted RBP22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 TYMPP19971 482 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 ERVFC1P60507 584 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 CETN1Q12798 172 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 SGSM1Q2NKQ1 1148 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 CDKAL1Q5VV42 579 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 TMEM130Q8N3G9 435 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 SPATA18Q8TC71 538 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 FAM84AQ96KN4 292 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 SENP8Q96LD8 212 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 DSEQ9UL01 958 aa22.38■■□□□ 1.17
GRAMD1A-214ENST00000603907 COQ4Q9Y3A0 265 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms