RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 TRIM49CP0CI26 452 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TRIM21P19474 475 aaKnown RBP10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 IGFBP4P22692 258 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 BRCC3P46736 316 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 GCLMP48507 274 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 LHX1P48742 406 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 ZNF165P49910 485 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 GUCY2FP51841 1108 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TNNC1P63316 161 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 MYL7Q01449 175 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 PPP3CAQ08209 521 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 MAN2A1Q16706 1144 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 DUSP6Q16828 381 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 ANO6Q4KMQ2 910 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 ZNF667Q5HYK9 610 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 VARS2Q5ST30 1063 aaKnown RBP10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 PLPP4Q5VZY2 271 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 OVOS1Q6IE37 1185 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TMEM184AQ6ZMB5 413 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 C11orf57Q6ZUT1 292 aaPredicted RBP10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 THEM5Q8N1Q8 247 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 LNX1Q8TBB1 728 aaPredicted RBP10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 MICAL1Q8TDZ2 1067 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 RIN2Q8WYP3 895 aaPredicted RBP10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 POP1Q99575 1024 aaKnown RBP10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 ANP32EQ9BTT0 268 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 RHOBTB2Q9BYZ6 727 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 NIF3L1Q9GZT8 377 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 DNAJC25Q9H1X3 360 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 HSFX1Q9UBD0 423 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CACNG4Q9UBN1 327 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 COG5Q9UP83 839 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 DAAM1Q9Y4D1 1078 aa10.18□□□□□ -0.78
SQSTM1P1-201ENST00000603451 PLXNA3P51805 1871 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 KCNJ18B7U540 433 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 RFXAPO00287 272 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CYB561D2O14569 222 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 GABRDO14764 452 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 PPEF2O14830 753 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 SPTLC1O15269 473 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TBC1D4O60343 1298 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 PAPLNO95428 1278 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 HLA-DRAP01903 254 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 POU2F2P09086 479 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TBXAS1P24557 533 aaPredicted RBP10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 PCSK1P29120 753 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TKTP29401 623 aaKnown RBP10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 IRS1P35568 1242 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 MTIF2P46199 727 aaKnown RBP10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 MYL6P60660 151 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TPM4P67936 248 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 NOP14P78316 857 aaKnown RBP10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 KCNH2Q12809 1159 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 KCNC3Q14003 757 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 RAB33AQ14088 237 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 KCNJ12Q14500 433 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 MAPRE1Q15691 268 aaKnown RBP10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CTC1Q2NKJ3 1217 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 WDR72Q3MJ13 1102 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TCP11X2Q5H9J9 407 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TCEAL5Q5H9L2 206 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 WDR44Q5JSH3 913 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TPGS2Q68CL5 300 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CYP26C1Q6V0L0 522 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 IRF2BP1Q8IU81 584 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 MAFAQ8NHW3 353 aaPredicted RBP10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TAS1R2Q8TE23 839 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 C2orf15Q8WU43 125 aaKnown RBP10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 RABGGTAQ92696 567 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CASP10Q92851 521 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 JAKMIP2Q96AA8 810 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 PABPC5Q96DU9 382 aaKnown RBP10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 EEF2KMTQ96G04 330 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 KLHL5Q96PQ7 755 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 ACBD6Q9BR61 282 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 PLEKHA4Q9H4M7 779 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TLE6Q9H808 572 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CYP3A43Q9HB55 503 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 RAB20Q9NX57 234 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 L1RE1Q9UN81 338 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 SNX9Q9Y5X1 595 aa10.17□□□□□ -0.78
SQSTM1P1-201ENST00000603451 HIDE1A8MVS5 230 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 TEX28O15482 410 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 GLUD1P00367 558 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CST3P01034 146 aaPredicted RBP10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CNPP09543 421 aaKnown RBP10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 ZNF18P17022 549 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 HOXB8P17481 243 aaPredicted RBP10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 RFX1P22670 979 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 WARSP23381 471 aaKnown RBP10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 HOXA9P31269 272 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 NRIP1P48552 1158 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CLCN4P51793 760 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 ZNF445P59923 1031 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 YWHAEP62258 255 aaKnown RBP10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 GCNT1Q02742 428 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 INCA1Q0VD86 236 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 HYAL1Q12794 435 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 SOWAHAQ2M3V2 549 aa10.16□□□□□ -0.78
SQSTM1P1-201ENST00000603451 CTXN3Q4LDR2 81 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms