RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 RAB33AQ14088 237 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 NFKBIBQ15653 356 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 TPD52L1Q16890 204 aaPredicted RBP14.92□□□□□ -0.02
RNF40-212ENST00000602784 SGSM1Q2NKQ1 1148 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 KRT39Q6A163 491 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 OVOS1Q6IE37 1185 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 SLC8B1Q6J4K2 584 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 IRF2BP1Q8IU81 584 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 TRIM59Q8IWR1 403 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 TMEM86AQ8N2M4 240 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 TOP6BLQ8N6T0 577 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 SLC22A17Q8WUG5 538 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 COG5Q9UP83 839 aa14.92□□□□□ -0.02
RNF40-212ENST00000602784 REV3LO60673 3130 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.91□□□□□ -0.02
RNF40-212ENST00000602784 SRGAP2BP0DMP2 458 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 GTF2F1P35269 517 aaKnown RBP eCLIP14.91□□□□□ -0.02
RNF40-212ENST00000602784 CLCN4P51793 760 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 CTXN3Q4LDR2 81 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 TCERG1LQ5VWI1 586 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 ZNF280DQ6N043 979 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 LILRA6Q6PI73 481 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 METTL23Q86XA0 190 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 FAM114A1Q8IWE2 563 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 HDAC7Q8WUI4 952 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 PPM1EQ8WY54 764 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 HLA-CQ95604 372 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 NAT10Q9H0A0 1025 aaKnown RBP14.91□□□□□ -0.02
RNF40-212ENST00000602784 IGFLR1Q9H665 355 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 DPP7Q9UHL4 492 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 FBXL5Q9UKA1 691 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 MAFFQ9ULX9 164 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 COQ4Q9Y3A0 265 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 SNX9Q9Y5X1 595 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 BRWD1Q9NSI6 2320 aa14.91□□□□□ -0.02
RNF40-212ENST00000602784 OR6C75A6NL08 312 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 P4HA2O15460 535 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 N4BP1O75113 896 aaKnown RBP14.9□□□□□ -0.02
RNF40-212ENST00000602784 ASS1P00966 412 aaKnown RBP14.9□□□□□ -0.02
RNF40-212ENST00000602784 HLA-DRAP01903 254 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 RPL17P18621 184 aaKnown RBP14.9□□□□□ -0.02
RNF40-212ENST00000602784 OR1D2P34982 312 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 MXI1P50539 228 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 SKIV2LQ15477 1246 aaKnown RBP14.9□□□□□ -0.02
RNF40-212ENST00000602784 SOWAHAQ2M3V2 549 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 WDR72Q3MJ13 1102 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 DCAF17Q5H9S7 520 aaPredicted RBP14.9□□□□□ -0.02
RNF40-212ENST00000602784 WSCD1Q658N2 575 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 RTL10Q7L3V2 364 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 PDCL2Q8N4E4 241 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 FBXL13Q8NEE6 735 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 CASP10Q92851 521 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 FAXDC2Q96IV6 333 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 L1RE1Q9UN81 338 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 TIMM13Q9Y5L4 95 aaPredicted RBP14.9□□□□□ -0.02
RNF40-212ENST00000602784 HCFC2Q9Y5Z7 792 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 CDY1Q9Y6F8 540 aa14.9□□□□□ -0.02
RNF40-212ENST00000602784 GABRDO14764 452 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 ADAM12O43184 909 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 TACC1O75410 805 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 ABLIM3O94929 683 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 GLP2RO95838 553 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 GLUD1P00367 558 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 P4HA1P13674 534 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 PRKCSHP14314 528 aaPredicted RBP14.89□□□□□ -0.03
RNF40-212ENST00000602784 HOXB8P17481 243 aaPredicted RBP14.89□□□□□ -0.03
RNF40-212ENST00000602784 LTBRP36941 435 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 PIK3CAP42336 1068 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 LHX1P48742 406 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 FMO5P49326 533 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 ZNF699Q32M78 642 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 ZNF667Q5HYK9 610 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 TPGS2Q68CL5 300 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 ELMSAN1Q6PJG2 1045 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 RSPO2Q6UXX9 243 aaPredicted RBP14.89□□□□□ -0.03
RNF40-212ENST00000602784 C11orf57Q6ZUT1 292 aaPredicted RBP14.89□□□□□ -0.03
RNF40-212ENST00000602784 THEM5Q8N1Q8 247 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 CCDC150Q8NCX0 1101 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 VN1R2Q8NFZ6 395 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 ZNF461Q8TAF7 563 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 TAS1R2Q8TE23 839 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 CNOT6LQ96LI5 555 aaKnown RBP14.89□□□□□ -0.03
RNF40-212ENST00000602784 BPIFA3Q9BQP9 254 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 FUCA2Q9BTY2 467 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 IMPG2Q9BZV3 1241 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 DNAJC25Q9H1X3 360 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 PLEKHA4Q9H4M7 779 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 UBE2ZQ9H832 354 aaPredicted RBP14.89□□□□□ -0.03
RNF40-212ENST00000602784 DZANK1Q9NVP4 752 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 RAB20Q9NX57 234 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 CLDND1Q9NY35 253 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.89□□□□□ -0.03
RNF40-212ENST00000602784 COL6A3P12111 3177 aa14.89□□□□□ -0.03
RNF40-212ENST00000602784 SYCE3A1L190 88 aa14.88□□□□□ -0.03
RNF40-212ENST00000602784 LINC01565O15544 149 aa14.88□□□□□ -0.03
RNF40-212ENST00000602784 TGM5O43548 720 aa14.88□□□□□ -0.03
RNF40-212ENST00000602784 TNNC1P63316 161 aa14.88□□□□□ -0.03
RNF40-212ENST00000602784 MYL5Q02045 173 aa14.88□□□□□ -0.03
RNF40-212ENST00000602784 CETN1Q12798 172 aa14.88□□□□□ -0.03
RNF40-212ENST00000602784 KCNH2Q12809 1159 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms