RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 BORCS6Q96GS4 357 aa24.5■■□□□ 1.51
SSBP4-209ENST00000601357 PGLYRP2Q96PD5 576 aa24.5■■□□□ 1.51
SSBP4-209ENST00000601357 KXD1Q9BQD3 176 aa24.5■■□□□ 1.51
SSBP4-209ENST00000601357 CBWD1Q9BRT8 395 aa24.5■■□□□ 1.51
SSBP4-209ENST00000601357 TMEM206Q9H813 350 aa24.5■■□□□ 1.51
SSBP4-209ENST00000601357 ARHGEF3Q9NR81 526 aa24.5■■□□□ 1.51
SSBP4-209ENST00000601357 YIPF1Q9Y548 306 aa24.5■■□□□ 1.51
SSBP4-209ENST00000601357 TCHHQ07283 1943 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 H0Y858 1186 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 ZNF197O14709 1029 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 ECI2O75521 394 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 PRPF6O94906 941 aaKnown RBP24.49■■□□□ 1.51
SSBP4-209ENST00000601357 LDHAP00338 332 aaKnown RBP24.49■■□□□ 1.51
SSBP4-209ENST00000601357 TAF6P49848 677 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 ATL3Q6DD88 541 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 PHLDB3Q6NSJ2 640 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 PDZD4Q76G19 769 aaPredicted RBP24.49■■□□□ 1.51
SSBP4-209ENST00000601357 SYCP3Q8IZU3 236 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 ELMOD1Q8N336 334 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 IQUBQ8NA54 791 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 GLIS3Q8NEA6 775 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 OR10T2Q8NGX3 314 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 DHX58Q96C10 678 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 TMEM209Q96SK2 561 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 TBC1D17Q9HA65 648 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 CACNA1HO95180 2353 aa24.49■■□□□ 1.51
SSBP4-209ENST00000601357 MOSPD3O75425 235 aa24.48■■□□□ 1.51
SSBP4-209ENST00000601357 FOXD4L6Q3SYB3 417 aaPredicted RBP24.48■■□□□ 1.51
SSBP4-209ENST00000601357 IQCEQ6IPM2 695 aa24.48■■□□□ 1.51
SSBP4-209ENST00000601357 CENPPQ6IPU0 288 aa24.48■■□□□ 1.51
SSBP4-209ENST00000601357 FOXD4L3Q6VB84 417 aaPredicted RBP24.48■■□□□ 1.51
SSBP4-209ENST00000601357 CCDC105Q8IYK2 499 aa24.48■■□□□ 1.51
SSBP4-209ENST00000601357 HS6ST3Q8IZP7 471 aa24.48■■□□□ 1.51
SSBP4-209ENST00000601357 LEMD2Q8NC56 503 aa24.48■■□□□ 1.51
SSBP4-209ENST00000601357 HPS3Q969F9 1004 aa24.48■■□□□ 1.51
SSBP4-209ENST00000601357 ZNF512Q96ME7 567 aaPredicted RBP24.48■■□□□ 1.51
SSBP4-209ENST00000601357 RBAKQ9NYW8 714 aaPredicted RBP24.48■■□□□ 1.51
SSBP4-209ENST00000601357 DSEQ9UL01 958 aa24.48■■□□□ 1.51
SSBP4-209ENST00000601357 VPS13AQ96RL7 3174 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 MTMR11A4FU01 709 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 EXTL3O43909 919 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 FCARP24071 287 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 HOXD13P35453 343 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 AMPD3Q01432 767 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 DUSP4Q13115 394 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 CYP4A22Q5TCH4 519 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 EPM2AIP1Q7L775 607 aaPredicted RBP24.47■■□□□ 1.51
SSBP4-209ENST00000601357 CXorf38Q8TB03 319 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 C7orf25Q9BPX7 421 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 PYM1Q9BRP8 204 aaKnown RBP24.47■■□□□ 1.51
SSBP4-209ENST00000601357 LRRC3Q9BY71 257 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 DNAJC25Q9H1X3 360 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 FAM86C1Q9NVL1 165 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 HSFX1Q9UBD0 423 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 PCDHA7Q9UN72 937 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 GTF3C3Q9Y5Q9 886 aa24.47■■□□□ 1.51
SSBP4-209ENST00000601357 COL4A3Q01955 1670 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 CYB561D2O14569 222 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 STARD6P59095 220 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 PLD1Q13393 1074 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 SV2CQ496J9 727 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 ARMCX5Q6P1M9 558 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 STXBP4Q6ZWJ1 553 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 C1orf127Q8N9H9 656 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 ATAD1Q8NBU5 361 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 ATOH1Q92858 354 aaPredicted RBP24.46■■□□□ 1.51
SSBP4-209ENST00000601357 ELSPBP1Q96BH3 223 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 PLA2G2FQ9BZM2 168 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 ZCWPW1Q9H0M4 648 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 MAGEF1Q9HAY2 307 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 ASAH2Q9NR71 780 aa24.46■■□□□ 1.51
SSBP4-209ENST00000601357 GOLGA8IPA6NC78 632 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 GOLGA8JA6NMD2 632 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 KPNA7A9QM74 516 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 KIAA0391O15091 583 aaKnown RBP24.45■■□□□ 1.5
SSBP4-209ENST00000601357 EIF3DO15371 548 aaKnown RBP eCLIP24.45■■□□□ 1.5
SSBP4-209ENST00000601357 POLR2DO15514 142 aaKnown RBP24.45■■□□□ 1.5
SSBP4-209ENST00000601357 EHHADHQ08426 723 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 FAM78AQ5JUQ0 283 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 RESP18Q5W5W9 173 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 TANGO2Q6ICL3 276 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 TMC8Q8IU68 726 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 TTC9BQ8N6N2 239 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 DTWD2Q8NBA8 298 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 ZNF560Q96MR9 790 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 ASB16Q96NS5 453 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 PCIF1Q9H4Z3 704 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 DLGAP2Q9P1A6 1054 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 SLC27A5Q9Y2P5 690 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 DMDP11532 3685 aa24.45■■□□□ 1.5
SSBP4-209ENST00000601357 STK25O00506 426 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 PNPLA4P41247 253 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 ME1P48163 572 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 ASIC1P78348 528 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 TFAMQ00059 246 aaKnown RBP24.44■■□□□ 1.5
SSBP4-209ENST00000601357 DNM1Q05193 864 aaKnown RBP24.44■■□□□ 1.5
SSBP4-209ENST00000601357 WSCD1Q658N2 575 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 METTL23Q86XA0 190 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 GPD1LQ8N335 351 aa24.44■■□□□ 1.5
SSBP4-209ENST00000601357 SPRYD3Q8NCJ5 442 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms