RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 GPR17Q13304 367 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 SURF1Q15526 300 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 CENPPQ6IPU0 288 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 ZNF280DQ6N043 979 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 ELMSAN1Q6PJG2 1045 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 POTEHQ6S545 545 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 SPATA31D4Q6ZUB0 917 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 HS2ST1Q7LGA3 356 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 NELFCDQ8IXH7 590 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 ZNF516Q92618 1163 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 LRFN3Q9BTN0 628 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 XYLT2Q9H1B5 865 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 VRTNQ9H8Y1 702 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 CHMP5Q9NZZ3 219 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 AFF4Q9UHB7 1163 aaKnown RBP9.49□□□□□ -0.89
SSBP4-208ENST00000600628 NR2E1Q9Y466 385 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 NUB1Q9Y5A7 615 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 WDR87Q6ZQQ6 2873 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 OR6C75A6NL08 312 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 SPDYE4A6NLX3 237 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 KPNA7A9QM74 516 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 CLIC2O15247 247 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 GADD45BO75293 160 aaPredicted RBP9.48□□□□□ -0.89
SSBP4-208ENST00000600628 ITGB3P05106 788 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 C8AP07357 584 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 ODC1P11926 461 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 BMP6P22004 513 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 PNPLA4P41247 253 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 TAF6P49848 677 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 EPHA5P54756 1037 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 YWHAHQ04917 246 aaPredicted RBP9.48□□□□□ -0.89
SSBP4-208ENST00000600628 PNOCQ13519 176 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 EDRF1Q3B7T1 1238 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 OVOS1Q6IE37 1185 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 FOXR2Q6PJQ5 311 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 GLYCTKQ8IVS8 523 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 OR10T2Q8NGX3 314 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 TMC2Q8TDI7 906 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 CACTINQ8WUQ7 758 aaKnown RBP9.48□□□□□ -0.89
SSBP4-208ENST00000600628 EDAQ92838 391 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 FAM212AQ96EL1 285 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 CGRRF1Q99675 332 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 MTMR12Q9C0I1 747 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 CRISPLD1Q9H336 500 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 EPS15L1Q9UBC2 864 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 PCDHA5Q9Y5H7 936 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 TIMM13Q9Y5L4 95 aaPredicted RBP9.48□□□□□ -0.89
SSBP4-208ENST00000600628 OBSL1O75147 1896 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 CLUHO75153 1309 aa9.48□□□□□ -0.89
SSBP4-208ENST00000600628 MUC6Q6W4X9 2439 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.47□□□□□ -0.89
SSBP4-208ENST00000600628 FAM86C2PA6NEL3 165 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 PRR33A8MZF0 331 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 CYB561D2O14569 222 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 IKBKBO14920 756 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 PRPF40AO75400 957 aaKnown RBP9.47□□□□□ -0.89
SSBP4-208ENST00000600628 MICAL2O94851 1124 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 CST3P01034 146 aaPredicted RBP9.47□□□□□ -0.89
SSBP4-208ENST00000600628 C4BPAP04003 597 aaKnown RBP9.47□□□□□ -0.89
SSBP4-208ENST00000600628 NR3C1P04150 777 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 FAM163BP0C2L3 166 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 COL9A1P20849 921 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 SP100P23497 879 aaPredicted RBP9.47□□□□□ -0.89
SSBP4-208ENST00000600628 POLR2BP30876 1174 aaKnown RBP9.47□□□□□ -0.89
SSBP4-208ENST00000600628 CASP4P49662 377 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 CYP2J2P51589 502 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 RBP5P82980 135 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 TFAMQ00059 246 aaKnown RBP9.47□□□□□ -0.89
SSBP4-208ENST00000600628 DUOXA2Q1HG44 320 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 SOWAHAQ2M3V2 549 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 SV2CQ496J9 727 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 CTXN3Q4LDR2 81 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 PRSS36Q5K4E3 855 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 WSCD1Q658N2 575 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 RNF19BQ6ZMZ0 732 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 CCDC149Q6ZUS6 474 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 DPH6Q7L8W6 267 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 TRAPPC11Q7Z392 1133 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 LRRTM3Q86VH5 581 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 TMEM86AQ8N2M4 240 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 PLCD3Q8N3E9 789 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 TOP6BLQ8N6T0 577 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 SLC7A14Q8TBB6 771 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 KBTBD7Q8WVZ9 684 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 SMG7Q92540 1137 aaKnown RBP9.47□□□□□ -0.89
SSBP4-208ENST00000600628 ZNF560Q96MR9 790 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 TMEM209Q96SK2 561 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 LRRC3Q9BY71 257 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 ZCWPW1Q9H0M4 648 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 DNAJC25Q9H1X3 360 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 TSHZ2Q9NRE2 1034 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 DSEQ9UL01 958 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 L1RE1Q9UN81 338 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 AGAP1Q9UPQ3 857 aa9.47□□□□□ -0.89
SSBP4-208ENST00000600628 KIF26AQ9ULI4 1882 aaPredicted RBP9.47□□□□□ -0.89
SSBP4-208ENST00000600628 ZNF638Q14966 1978 aaKnown RBP9.46□□□□□ -0.89
SSBP4-208ENST00000600628 USP34Q70CQ2 3546 aa9.46□□□□□ -0.89
SSBP4-208ENST00000600628 MTMR11A4FU01 709 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 LRRIQ3A6PVS8 624 aaPredicted RBP9.46□□□□□ -0.9
SSBP4-208ENST00000600628 ANHXE9PGG2 379 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms