RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 URODP06132 367 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 PIK3CAP42336 1068 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 RAP1GAPP47736 663 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 NRIP1P48552 1158 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 MXI1P50539 228 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 CDH8P55286 799 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 APBA1Q02410 837 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 ELAVL2Q12926 359 aaKnown RBP12.72□□□□□ -0.37
FARP1-230ENST00000600380 TRPC3Q13507 836 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 SMC1AQ14683 1233 aaKnown RBP12.72□□□□□ -0.37
FARP1-230ENST00000600380 KRT31Q15323 416 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 PTPROQ16827 1216 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 TCP11X2Q5H9J9 407 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 KRT39Q6A163 491 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 LUZP1Q86V48 1076 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 GLYCTKQ8IVS8 523 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 KBTBD7Q8WVZ9 684 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 TATDN2Q93075 761 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 ZNF560Q96MR9 790 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 GAS2L1Q99501 681 aaPredicted RBP12.72□□□□□ -0.37
FARP1-230ENST00000600380 MRPL45Q9BRJ2 306 aaKnown RBP12.72□□□□□ -0.37
FARP1-230ENST00000600380 SMYD3Q9H7B4 428 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 MRPL17Q9NRX2 175 aaKnown RBP12.72□□□□□ -0.37
FARP1-230ENST00000600380 TAB2Q9NYJ8 693 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 LMCD1Q9NZU5 365 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
FARP1-230ENST00000600380 COQ4Q9Y3A0 265 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.72□□□□□ -0.37
FARP1-230ENST00000600380 IRAK3Q9Y616 596 aa12.72□□□□□ -0.37
FARP1-230ENST00000600380 EYSQ5T1H1 3165 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 SYN3O14994 580 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 TRAPPC3O43617 180 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 OAZ2O95190 189 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 VNN2O95498 520 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
FARP1-230ENST00000600380 AFPP02771 609 aaKnown RBP12.71□□□□□ -0.37
FARP1-230ENST00000600380 CYP11A1P05108 521 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 OR4Q2P0C623 313 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 TYMPP19971 482 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 CA8P35219 290 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 PNPLA4P41247 253 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 MTIF2P46199 727 aaKnown RBP12.71□□□□□ -0.37
FARP1-230ENST00000600380 MYL7Q01449 175 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 PSMD5Q16401 504 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 DUSP6Q16828 381 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 ZNF699Q32M78 642 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 WDR72Q3MJ13 1102 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 SV2CQ496J9 727 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 KIAA1841Q6NSI8 718 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 DPY19L2P1Q6NXN4 242 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 SCARA5Q6ZMJ2 495 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 LRRTM3Q86VH5 581 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 OR10T2Q8NGX3 314 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 SLC22A17Q8WUG5 538 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 PPM1EQ8WY54 764 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 LPIN3Q9BQK8 851 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 TUBGCP2Q9BSJ2 902 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 CRACR2AQ9BSW2 395 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.37
FARP1-230ENST00000600380 IGFLR1Q9H665 355 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 TLE6Q9H808 572 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 VRTNQ9H8Y1 702 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 PRDM6Q9NQX0 595 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 RAB20Q9NX57 234 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 MTRRQ9UBK8 725 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 FBXL5Q9UKA1 691 aa12.71□□□□□ -0.37
FARP1-230ENST00000600380 SPTBN5Q9NRC6 3674 aaKnown RBP12.7□□□□□ -0.38
FARP1-230ENST00000600380 TSC2P49815 1807 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 GABRDO14764 452 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 PMM2O15305 246 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 STX10O60499 249 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 GLP2RO95838 553 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 SPATA31D3P0C874 917 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 ODC1P11926 461 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 EPCAMP16422 314 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 LMO2P25791 158 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 ATICP31939 592 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 OR1D2P34982 312 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 ASPAP45381 313 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 ZNF445P59923 1031 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 LRMPQ12912 555 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 MYO1EQ12965 1108 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 KCNC3Q14003 757 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 SGSM1Q2NKQ1 1148 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 CTXN3Q4LDR2 81 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 OVOS1Q6IE37 1185 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
FARP1-230ENST00000600380 LILRA6Q6PI73 481 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 LRSAM1Q6UWE0 723 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 SPATA31D4Q6ZUB0 917 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 USP37Q86T82 979 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 PALB2Q86YC2 1186 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 GPR65Q8IYL9 337 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 FBXL13Q8NEE6 735 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 APPL2Q8NEU8 664 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 KAT5Q92993 513 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 ARID3AQ99856 593 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 VPS16Q9H269 839 aa12.7□□□□□ -0.38
FARP1-230ENST00000600380 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms