RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 VNN2O95498 520 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 CEBPBP17676 345 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 SMARCB1Q12824 385 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 E2F4Q16254 413 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 CENPPQ6IPU0 288 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 STXBP4Q6ZWJ1 553 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 SYCP3Q8IZU3 236 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 PDILTQ8N807 584 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 KXD1Q9BQD3 176 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 DDX23Q9BUQ8 820 aaKnown RBP17.09■□□□□ 0.33
VRK3-221ENST00000600284 GPR88Q9GZN0 384 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 IKZF4Q9H2S9 585 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 ASAH2Q9NR71 780 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
VRK3-221ENST00000600284 YIPF1Q9Y548 306 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 ASB3Q9Y575 518 aa17.09■□□□□ 0.33
VRK3-221ENST00000600284 CYB561D2O14569 222 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 OR4Q2P0C623 313 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 PNPLA4P41247 253 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 CCR2P41597 374 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 ALDH1A3P47895 512 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 CASP5P51878 434 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 EPHB3P54753 998 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 DUSP4Q13115 394 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 ANGPT1Q15389 498 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 MLF2Q15773 248 aaPredicted RBP17.08■□□□□ 0.32
VRK3-221ENST00000600284 ATL3Q6DD88 541 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 TANGO2Q6ICL3 276 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 CNNM4Q6P4Q7 775 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 POTEHQ6S545 545 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 METTL23Q86XA0 190 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 BRSK2Q8IWQ3 736 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 EFCAB13Q8IY85 973 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 THEM5Q8N1Q8 247 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 IQUBQ8NA54 791 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 CACTINQ8WUQ7 758 aaKnown RBP17.08■□□□□ 0.32
VRK3-221ENST00000600284 TCEAL4Q96EI5 215 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 FAM213AQ9BRX8 229 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 OSBPL6Q9BZF3 934 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 ZFP14Q9HCL3 533 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 DLGAP2Q9P1A6 1054 aa17.08■□□□□ 0.32
VRK3-221ENST00000600284 KANSL1LA0AUZ9 987 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 MTMR11A4FU01 709 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 KPNA7A9QM74 516 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 EXTL3O43909 919 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 MOSPD3O75425 235 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 HSP90AA1P07900 732 aaKnown RBP17.07■□□□□ 0.32
VRK3-221ENST00000600284 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
VRK3-221ENST00000600284 TUFMP49411 452 aaKnown RBP17.07■□□□□ 0.32
VRK3-221ENST00000600284 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
VRK3-221ENST00000600284 SV2CQ496J9 727 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 FAM78AQ5JUQ0 283 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 HS6ST3Q8IZP7 471 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 PJA1Q8NG27 643 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 KCNG4Q8TDN1 519 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 BORCS6Q96GS4 357 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 ZNF560Q96MR9 790 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 ASB16Q96NS5 453 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 PGLYRP2Q96PD5 576 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 PYM1Q9BRP8 204 aaKnown RBP17.07■□□□□ 0.32
VRK3-221ENST00000600284 PLA2G2FQ9BZM2 168 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 TRIM9Q9C026 710 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 MAGEF1Q9HAY2 307 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 TRPV4Q9HBA0 871 aa17.07■□□□□ 0.32
VRK3-221ENST00000600284 GFRA3O60609 400 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 FGF19O95750 216 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 MYL4P12829 197 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 FCARP24071 287 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 ITIH5Q86UX2 942 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 ATAD1Q8NBU5 361 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 C2orf15Q8WU43 125 aaKnown RBP17.06■□□□□ 0.32
VRK3-221ENST00000600284 DNASE1L2Q92874 299 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 SMARCD2Q92925 531 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 E2F7Q96AV8 911 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 SAAL1Q96ER3 474 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 NELL2Q99435 816 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 LRRC3Q9BY71 257 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 FGFBP2Q9BYJ0 223 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 CRISPLD1Q9H336 500 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 RBAKQ9NYW8 714 aaPredicted RBP17.06■□□□□ 0.32
VRK3-221ENST00000600284 SLC27A5Q9Y2P5 690 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 MYH15Q9Y2K3 1946 aa17.06■□□□□ 0.32
VRK3-221ENST00000600284 EIF3DO15371 548 aaKnown RBP eCLIP17.05■□□□□ 0.32
VRK3-221ENST00000600284 PRPF6O94906 941 aaKnown RBP17.05■□□□□ 0.32
VRK3-221ENST00000600284 F13A1P00488 732 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 MAGEA9P43362 315 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 TFAMQ00059 246 aaKnown RBP17.05■□□□□ 0.32
VRK3-221ENST00000600284 SHC4Q6S5L8 630 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 GPD1LQ8N335 351 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 LRRC52Q8N7C0 313 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 OR10T2Q8NGX3 314 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 DEPDC1BQ8WUY9 529 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 PSMG2Q969U7 264 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 TMEM209Q96SK2 561 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 C7orf25Q9BPX7 421 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 CBWD1Q9BRT8 395 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 TRMT61BQ9BVS5 477 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms