RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 TLE6Q9H808 572 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 RAB20Q9NX57 234 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 MTRRQ9UBK8 725 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 MAFFQ9ULX9 164 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 TRIP11Q15643 1979 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 GTPBP10A4D1E9 387 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 OR6C75A6NL08 312 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 TACC1O75410 805 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 VNN1O95497 513 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 HLA-DRAP01903 254 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 TPM2P07951 284 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 SRGAP2BP0DMP2 458 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 TKTP29401 623 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 PIK3CAP42336 1068 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 MTIF2P46199 727 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 LHX1P48742 406 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 MYL6P60660 151 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 TNNC1P63316 161 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 KCNH2Q12809 1159 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 PSMD5Q16401 504 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 MAN2A1Q16706 1144 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 WDR72Q3MJ13 1102 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 TCP11X2Q5H9J9 407 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 ZNF667Q5HYK9 610 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 WDR44Q5JSH3 913 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 OVOS1Q6IE37 1185 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 SLC8B1Q6J4K2 584 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 RTL10Q7L3V2 364 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 THEM5Q8N1Q8 247 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 TTC39CQ8N584 583 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 SNX9Q9Y5X1 595 aa17.78■□□□□ 0.44
SHKBP1-219ENST00000599575 HIDE1A8MVS5 230 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 BECN2A8MW95 431 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 KCNJ18B7U540 433 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 I3L4J1 428 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 TBC1D4O60343 1298 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 IGFBP6P24592 240 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 TPM4P67936 248 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 SMARCB1Q12824 385 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 KCNJ12Q14500 433 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 COL19A1Q14993 1142 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 DUSP6Q16828 381 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 EFHBQ8N7U6 833 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 TAS1R2Q8TE23 839 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 HDAC7Q8WUI4 952 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 TUBGCP2Q9BSJ2 902 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 DNAI2Q9GZS0 605 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 FANCLQ9NW38 375 aa17.77■□□□□ 0.44
SHKBP1-219ENST00000599575 COL4A4P53420 1690 aaPredicted RBP17.77■□□□□ 0.43
SHKBP1-219ENST00000599575 LRRC10BA6NIK2 292 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 TEX28O15482 410 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 CNPP09543 421 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 MYL7Q01449 175 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 RAB33AQ14088 237 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 NCAPHQ15003 741 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 CBWD6Q4V339 395 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 TCEAL5Q5H9L2 206 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 CBWD3Q5JTY5 395 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 CBWD5Q5RIA9 395 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 LRSAM1Q6UWE0 723 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 TMEM184AQ6ZMB5 413 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 FAM81BQ96LP2 452 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 KLHL5Q96PQ7 755 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 CYP3A43Q9HB55 503 aa17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 SAMSN1Q9NSI8 373 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-219ENST00000599575 C2CD2LO14523 706 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 GABRDO14764 452 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 ZNF18P17022 549 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 KLRC2P26717 231 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 PCSK1P29120 753 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 CA8P35219 290 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 ZNF445P59923 1031 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 NOP14P78316 857 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 SOWAHAQ2M3V2 549 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 CTXN3Q4LDR2 81 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 TPGS2Q68CL5 300 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 CREBRFQ8IUR6 639 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 PDCL2Q8N4E4 241 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 AOPEPQ8N6M6 819 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 FAM200AQ8TCP9 573 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 FAM84AQ96KN4 292 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 B3GALT6Q96L58 329 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 MMS19Q96T76 1030 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 CLSTN3Q9BQT9 956 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 ACBD6Q9BR61 282 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 NIF3L1Q9GZT8 377 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 NDST4Q9H3R1 872 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 PLEKHA4Q9H4M7 779 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 MMRN2Q9H8L6 949 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 L1RE1Q9UN81 338 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 PLXNA4Q9HCM2 1894 aa17.75■□□□□ 0.43
SHKBP1-219ENST00000599575 CLASP2O75122 1294 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 TRIM21P19474 475 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 CDK11BP21127 795 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 WARSP23381 471 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 NRIP1P48552 1158 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 HYAL1Q12794 435 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 KCNC3Q14003 757 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 IQCB1Q15051 598 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 CTC1Q2NKJ3 1217 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms