RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 LAMP2P13473 410 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 POLR2BP30876 1174 aaKnown RBP17.98■□□□□ 0.47
USHBP1-208ENST00000598309 ADCY1Q08828 1119 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 GPR17Q13304 367 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 TDGQ13569 410 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 SNRNP35Q16560 246 aaKnown RBP17.98■□□□□ 0.47
USHBP1-208ENST00000598309 KMT5BQ4FZB7 885 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 PABPC1LQ4VXU2 614 aaKnown RBP17.98■□□□□ 0.47
USHBP1-208ENST00000598309 HFE2Q6ZVN8 426 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 METTL23Q86XA0 190 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 KIAA0895Q8NCT3 520 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 CXorf38Q8TB03 319 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 ASIC4Q96FT7 647 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 BORCS6Q96GS4 357 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 KCNK12Q9HB15 430 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 INTS13Q9NVM9 706 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 HCN4Q9Y3Q4 1203 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 TSC2P49815 1807 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 CYB561D2O14569 222 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 ITGB3P05106 788 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 TMEM191BP0C7N4 346 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 NTHL1P78549 312 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 STK4Q13043 487 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 RNF19BQ6ZMZ0 732 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 KRBA2Q6ZNG9 492 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 WDR49Q8IV35 697 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 XXYLT1Q8NBI6 393 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 TMEM174Q8WUU8 243 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 CCDC47Q96A33 483 aaKnown RBP17.97■□□□□ 0.47
USHBP1-208ENST00000598309 ANKRD36BP1Q96IX9 119 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 MFSD14AQ96MC6 490 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 MTMR12Q9C0I1 747 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 GOLPH3LQ9H4A5 285 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 GDPD2Q9HCC8 539 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 DNMT3BQ9UBC3 853 aaKnown RBP17.97■□□□□ 0.47
USHBP1-208ENST00000598309 HSFX1Q9UBD0 423 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 CDH7Q9ULB5 785 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 AGAP1Q9UPQ3 857 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 DOCK8Q8NF50 2099 aa17.97■□□□□ 0.47
USHBP1-208ENST00000598309 SCN1AP35498 2009 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 TCHHQ07283 1943 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 ANHXE9PGG2 379 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 PRPF40AO75400 957 aaKnown RBP17.96■□□□□ 0.47
USHBP1-208ENST00000598309 OR4Q2P0C623 313 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 CYP2J2P51589 502 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 RBP5P82980 135 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 PLD1Q13393 1074 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 ELMOD1Q8N336 334 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 SPATA18Q8TC71 538 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 CCDC34Q96HJ3 373 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 HCFC1R1Q9NWW0 138 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 SIX4Q9UIU6 781 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 DUSP12Q9UNI6 340 aa17.96■□□□□ 0.47
USHBP1-208ENST00000598309 ARIH1Q9Y4X5 557 aaPredicted RBP17.96■□□□□ 0.47
USHBP1-208ENST00000598309 CLIC2O15247 247 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 ZNF202O95125 648 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 VNN2O95498 520 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 TNNC2P02585 160 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 RPN1P04843 607 aaKnown RBP17.95■□□□□ 0.46
USHBP1-208ENST00000598309 RHOP08100 348 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 PTPN2P17706 415 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 CYP24A1Q07973 514 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 DPYDQ12882 1025 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 HTR4Q13639 388 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 PSMD6Q15008 389 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 DUOXA2Q1HG44 320 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 WSCD1Q658N2 575 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 THEM5Q8N1Q8 247 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 CSGALNACT2Q8N6G5 542 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 LEMD2Q8NC56 503 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 OR10T2Q8NGX3 314 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 FGF13Q92913 245 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 PBXIP1Q96AQ6 731 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 ZCWPW1Q9H0M4 648 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 GDAP2Q9NXN4 497 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 MRPS23Q9Y3D9 190 aaKnown RBP17.95■□□□□ 0.46
USHBP1-208ENST00000598309 YIPF1Q9Y548 306 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 PTPRJQ12913 1337 aa17.95■□□□□ 0.46
USHBP1-208ENST00000598309 MTMR11A4FU01 709 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
USHBP1-208ENST00000598309 MICAL2O94851 1124 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 RHOBTB3O94955 611 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 KIF20AO95235 890 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 KRT19P08727 400 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 PRR29P0C7W0 189 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 TWF1Q12792 350 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 SMARCB1Q12824 385 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 BFSP1Q12934 665 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 MYO1EQ12965 1108 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 IQCEQ6IPM2 695 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 CENPPQ6IPU0 288 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 SLC9A9Q8IVB4 645 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 NPAS3Q8IXF0 933 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 TMEM86AQ8N2M4 240 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 FBXL6Q8N531 539 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 OR5B17Q8NGF7 314 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 ITFG1Q8TB96 612 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 C2orf15Q8WU43 125 aaKnown RBP17.94■□□□□ 0.46
USHBP1-208ENST00000598309 FAM84AQ96KN4 292 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 PGLYRP2Q96PD5 576 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms