RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 FOXD4L3Q6VB84 417 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-205ENST00000598159 PDZD4Q76G19 769 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-205ENST00000598159 METTL23Q86XA0 190 aa24.88■■□□□ 1.57
SSBP4-205ENST00000598159 CEP72Q9P209 647 aa24.88■■□□□ 1.57
SSBP4-205ENST00000598159 CYB561D2O14569 222 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 PI15O43692 258 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 EXTL3O43909 919 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 OR4Q2P0C623 313 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 MRE11P49959 708 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 PLD1Q13393 1074 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 PHLDB3Q6NSJ2 640 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 BRSK2Q8IWQ3 736 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 EFCAB13Q8IY85 973 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 THEM5Q8N1Q8 247 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 SAAL1Q96ER3 474 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 C7orf25Q9BPX7 421 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 FGFBP2Q9BYJ0 223 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 MAGEF1Q9HAY2 307 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 FAM13BQ9NYF5 915 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 HSFX1Q9UBD0 423 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 PCDHA7Q9UN72 937 aa24.87■■□□□ 1.57
SSBP4-205ENST00000598159 POLR2DO15514 142 aaKnown RBP24.86■■□□□ 1.57
SSBP4-205ENST00000598159 ECI2O75521 394 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 RFX1P22670 979 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 PNPLA4P41247 253 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 ME1P48163 572 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 DUSP4Q13115 394 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 CENPPQ6IPU0 288 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 SPRYD3Q8NCJ5 442 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 ATOH1Q92858 354 aaPredicted RBP24.86■■□□□ 1.57
SSBP4-205ENST00000598159 SHDQ96IW2 340 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 PGLYRP2Q96PD5 576 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 PYM1Q9BRP8 204 aaKnown RBP24.86■■□□□ 1.57
SSBP4-205ENST00000598159 CBWD1Q9BRT8 395 aa24.86■■□□□ 1.57
SSBP4-205ENST00000598159 RBAKQ9NYW8 714 aaPredicted RBP24.86■■□□□ 1.57
SSBP4-205ENST00000598159 KPNA7A9QM74 516 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 H0Y858 1186 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 VNN2O95498 520 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 CEBPBP17676 345 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 ALDH1A3P47895 512 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 EPHB3P54753 998 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 EPHA5P54756 1037 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 ASIC1P78348 528 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 TFAMQ00059 246 aaKnown RBP24.85■■□□□ 1.57
SSBP4-205ENST00000598159 PFKPQ01813 784 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 SV2CQ496J9 727 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 HS6ST3Q8IZP7 471 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 GPD1LQ8N335 351 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 ZSWIM2Q8NEG5 633 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 TCEAL4Q96EI5 215 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 BORCS6Q96GS4 357 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 ZNF560Q96MR9 790 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 PCIF1Q9H4Z3 704 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 ASAH2Q9NR71 780 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 ARHGEF3Q9NR81 526 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 RCOR1Q9UKL0 485 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 YIPF1Q9Y548 306 aa24.85■■□□□ 1.57
SSBP4-205ENST00000598159 GOLGA8IPA6NC78 632 aa24.84■■□□□ 1.57
SSBP4-205ENST00000598159 GOLGA8JA6NMD2 632 aa24.84■■□□□ 1.57
SSBP4-205ENST00000598159 TULP1O00294 542 aaPredicted RBP24.84■■□□□ 1.57
SSBP4-205ENST00000598159 EIF3DO15371 548 aaKnown RBP eCLIP24.84■■□□□ 1.57
SSBP4-205ENST00000598159 SMARCB1Q12824 385 aa24.84■■□□□ 1.57
SSBP4-205ENST00000598159 PKP1Q13835 747 aa24.84■■□□□ 1.57
SSBP4-205ENST00000598159 ZNF507Q8TCN5 953 aa24.84■■□□□ 1.57
SSBP4-205ENST00000598159 ELSPBP1Q96BH3 223 aa24.84■■□□□ 1.57
SSBP4-205ENST00000598159 KXD1Q9BQD3 176 aa24.84■■□□□ 1.57
SSBP4-205ENST00000598159 TBC1D17Q9HA65 648 aa24.84■■□□□ 1.57
SSBP4-205ENST00000598159 ASB3Q9Y575 518 aa24.84■■□□□ 1.57
SSBP4-205ENST00000598159 TCHHQ07283 1943 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 MTMR11A4FU01 709 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 CCR2P41597 374 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 STARD6P59095 220 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 RESP18Q5W5W9 173 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 POTEHQ6S545 545 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 ATAD1Q8NBU5 361 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 HPS3Q969F9 1004 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 TMEM209Q96SK2 561 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 PHOX2BQ99453 314 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 GPR88Q9GZN0 384 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 ZCWPW1Q9H0M4 648 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 CRISPLD1Q9H336 500 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 KIAA1586Q9HCI6 787 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 ZFP14Q9HCL3 533 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 SLC27A5Q9Y2P5 690 aa24.83■■□□□ 1.57
SSBP4-205ENST00000598159 ZNF233A6NK53 670 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 MYL4P12829 197 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 TUFMP49411 452 aaKnown RBP24.82■■□□□ 1.56
SSBP4-205ENST00000598159 WNT7BP56706 349 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 DNM1Q05193 864 aaKnown RBP24.82■■□□□ 1.56
SSBP4-205ENST00000598159 SURF1Q15526 300 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 SLC44A4Q53GD3 710 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 FAM26FQ5R3K3 315 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 WSCD1Q658N2 575 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 TANGO2Q6ICL3 276 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 UNC13DQ70J99 1090 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 CCDC105Q8IYK2 499 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 CSGALNACT2Q8N6G5 542 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 DTWD2Q8NBA8 298 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 OR10T2Q8NGX3 314 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 NOC3LQ8WTT2 800 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms