RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 TMEM209Q96SK2 561 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 WDR6Q9NNW5 1121 aaKnown RBP24.59■■□□□ 1.53
IRF3-220ENST00000598108 TRAF3IP3Q9Y228 551 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 HNRNPA1P09651 372 aaKnown RBP eCLIP24.58■■□□□ 1.53
IRF3-220ENST00000598108 PNPLA4P41247 253 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 CASP4P49662 377 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 SV2CQ496J9 727 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 LRRC52Q8N7C0 313 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 ZNF560Q96MR9 790 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 FNBP1Q96RU3 617 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 CGRRF1Q99675 332 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 RTP3Q9BQQ7 232 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 PIDD1Q9HB75 910 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 MUTYHQ9UIF7 546 aa24.58■■□□□ 1.53
IRF3-220ENST00000598108 OR6C75A6NL08 312 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 PI4K2BG5E9Z4 385 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 VNN2O95498 520 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 TNNC2P02585 160 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 TNNI1P19237 187 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 HOXA9P31269 272 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 NTHL1P78549 312 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 TPGS2Q68CL5 300 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 CCDC149Q6ZUS6 474 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 TRAPPC11Q7Z392 1133 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 OR10T2Q8NGX3 314 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 GSDMAQ96QA5 445 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 CYP4F11Q9HBI6 524 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 NR2E1Q9Y466 385 aa24.57■■□□□ 1.52
IRF3-220ENST00000598108 N4BP1O75113 896 aaKnown RBP24.56■■□□□ 1.52
IRF3-220ENST00000598108 KIF20AO95235 890 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 CST3P01034 146 aaPredicted RBP24.56■■□□□ 1.52
IRF3-220ENST00000598108 CPB1P15086 417 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 ELF1P32519 619 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 ADCY1Q08828 1119 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 BFSP1Q12934 665 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 MYBPC2Q14324 1141 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 GRASPQ7Z6J2 395 aaPredicted RBP24.56■■□□□ 1.52
IRF3-220ENST00000598108 ELOA2Q8IYF1 753 aaPredicted RBP24.56■■□□□ 1.52
IRF3-220ENST00000598108 TCEAL8Q8IYN2 117 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 OXCT2Q9BYC2 517 aaPredicted RBP24.56■■□□□ 1.52
IRF3-220ENST00000598108 AFF4Q9UHB7 1163 aaKnown RBP24.56■■□□□ 1.52
IRF3-220ENST00000598108 DSEQ9UL01 958 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 USTQ9Y2C2 406 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 SCN1AP35498 2009 aa24.56■■□□□ 1.52
IRF3-220ENST00000598108 ARHGEF37A1IGU5 675 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 PRRG1O14668 218 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 CALUO43852 315 aaPredicted RBP24.55■■□□□ 1.52
IRF3-220ENST00000598108 KINO60870 393 aaKnown RBP24.55■■□□□ 1.52
IRF3-220ENST00000598108 SMC2O95347 1197 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 PRCPP42785 496 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 CEP135Q66GS9 1140 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 RTL10Q7L3V2 364 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 METTL23Q86XA0 190 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 PDCL2Q8N4E4 241 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 PARD3BQ8TEW8 1205 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 SMARCE1Q969G3 411 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 PGLYRP2Q96PD5 576 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 RMND1Q9NWS8 449 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 POLIQ9UNA4 740 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 CLUHO75153 1309 aa24.55■■□□□ 1.52
IRF3-220ENST00000598108 DCXO43602 365 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 PRPF40AO75400 957 aaKnown RBP24.54■■□□□ 1.52
IRF3-220ENST00000598108 CDR1P51861 262 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 GPR17Q13304 367 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 NFIL3Q16649 462 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 ZCWPW2Q504Y3 356 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 ZNF658Q5TYW1 1059 aaPredicted RBP24.54■■□□□ 1.52
IRF3-220ENST00000598108 TDRD5Q8NAT2 981 aaKnown RBP24.54■■□□□ 1.52
IRF3-220ENST00000598108 HPDLQ96IR7 371 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 CRISPLD1Q9H336 500 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 HCFC1R1Q9NWW0 138 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 GDAP2Q9NXN4 497 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 LIMD1Q9UGP4 676 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 HOOK1Q9UJC3 728 aaKnown RBP24.54■■□□□ 1.52
IRF3-220ENST00000598108 L1RE1Q9UN81 338 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 SNX9Q9Y5X1 595 aa24.54■■□□□ 1.52
IRF3-220ENST00000598108 LRRIQ3A6PVS8 624 aaPredicted RBP24.53■■□□□ 1.52
IRF3-220ENST00000598108 XYLBO75191 536 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 POU2F2P09086 479 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 UBE2HP62256 183 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 DLG4P78352 724 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 CLDN10P78369 228 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 ISM2Q6H9L7 571 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 OTOP3Q7RTS5 596 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 LRRTM3Q86VH5 581 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 ZDHHC14Q8IZN3 488 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 ATAD1Q8NBU5 361 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 MYADMQ96S97 322 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 ZCWPW1Q9H0M4 648 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 DNMT3BQ9UBC3 853 aaKnown RBP24.53■■□□□ 1.52
IRF3-220ENST00000598108 MAN1B1Q9UKM7 699 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 INSL5Q9Y5Q6 135 aa24.53■■□□□ 1.52
IRF3-220ENST00000598108 AKAP3O75969 853 aa24.52■■□□□ 1.52
IRF3-220ENST00000598108 NR2F2P24468 414 aa24.52■■□□□ 1.52
IRF3-220ENST00000598108 MAFFQ9ULX9 164 aa24.52■■□□□ 1.52
IRF3-220ENST00000598108 SLC27A5Q9Y2P5 690 aa24.52■■□□□ 1.52
IRF3-220ENST00000598108 HUS1O60921 280 aa24.51■■□□□ 1.51
IRF3-220ENST00000598108 ALADP13716 330 aa24.51■■□□□ 1.51
IRF3-220ENST00000598108 MYO1EQ12965 1108 aa24.51■■□□□ 1.51
IRF3-220ENST00000598108 DUSP4Q13115 394 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms