RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 CBWD5Q5RIA9 395 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 VARS2Q5ST30 1063 aaKnown RBP15.43■□□□□ 0.06
VRK3-213ENST00000597215 CDKAL1Q5VV42 579 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 CCDC150Q8NCX0 1101 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 FBXL13Q8NEE6 735 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 TAS1R2Q8TE23 839 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 XYLT2Q9H1B5 865 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 FANCLQ9NW38 375 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 PCDHGC5Q9Y5F6 944 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 SNX9Q9Y5X1 595 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 HIDE1A8MVS5 230 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 BECN2A8MW95 431 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 H7C4K7 107 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 LILRB3O75022 631 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 ASS1P00966 412 aaKnown RBP15.42■□□□□ 0.06
VRK3-213ENST00000597215 P4HA1P13674 534 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 TNNC1P63316 161 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 YWHAHQ04917 246 aaPredicted RBP15.42■□□□□ 0.06
VRK3-213ENST00000597215 NCAPHQ15003 741 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 ZNF667Q5HYK9 610 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 PRSS55Q6UWB4 352 aaPredicted RBP15.42■□□□□ 0.06
VRK3-213ENST00000597215 LRSAM1Q6UWE0 723 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 METTL23Q86XA0 190 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 DHX40Q8IX18 779 aaKnown RBP15.42■□□□□ 0.06
VRK3-213ENST00000597215 MICALL1Q8N3F8 863 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 TOP6BLQ8N6T0 577 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 ANKRD20A12PQ8NF67 263 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 LNX1Q8TBB1 728 aaPredicted RBP15.42■□□□□ 0.06
VRK3-213ENST00000597215 TUBGCP2Q9BSJ2 902 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 TSPY26PQ9H489 355 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 RXFP1Q9HBX9 757 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 RAB20Q9NX57 234 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 FNIP2Q9P278 1114 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 MTRRQ9UBK8 725 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 COQ4Q9Y3A0 265 aa15.42■□□□□ 0.06
VRK3-213ENST00000597215 TIMM13Q9Y5L4 95 aaPredicted RBP15.42■□□□□ 0.06
VRK3-213ENST00000597215 FSD2A1L4K1 749 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 OAZ2O95190 189 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 TPM2P07951 284 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 CNPP09543 421 aaKnown RBP15.41■□□□□ 0.06
VRK3-213ENST00000597215 PRKCSHP14314 528 aaPredicted RBP15.41■□□□□ 0.06
VRK3-213ENST00000597215 ZNF445P59923 1031 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 NOP14P78316 857 aaKnown RBP15.41■□□□□ 0.06
VRK3-213ENST00000597215 MRPL58Q14197 206 aaKnown RBP15.41■□□□□ 0.06
VRK3-213ENST00000597215 WDR72Q3MJ13 1102 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 TCEAL5Q5H9L2 206 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 WSCD1Q658N2 575 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 OVOS1Q6IE37 1185 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 ZNF280DQ6N043 979 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 DPH6Q7L8W6 267 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 ADGRD2Q7Z7M1 963 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 TMEM86AQ8N2M4 240 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 PDCL2Q8N4E4 241 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 SPATA18Q8TC71 538 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 MMS19Q96T76 1030 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 CDCA3Q99618 268 aaPredicted RBP15.41■□□□□ 0.06
VRK3-213ENST00000597215 OXCT2Q9BYC2 517 aaPredicted RBP15.41■□□□□ 0.06
VRK3-213ENST00000597215 TLE6Q9H808 572 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 CBX8Q9HC52 389 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 NXF1Q9UBU9 619 aaKnown RBP15.41■□□□□ 0.06
VRK3-213ENST00000597215 L1RE1Q9UN81 338 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 BACE2Q9Y5Z0 518 aa15.41■□□□□ 0.06
VRK3-213ENST00000597215 ADH1AP07327 375 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 ZNF18P17022 549 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 CDK11BP21127 795 aaKnown RBP15.4■□□□□ 0.06
VRK3-213ENST00000597215 NDUFV1P49821 464 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 TPM4P67936 248 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 IQCB1Q15051 598 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 CTXN3Q4LDR2 81 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 WDR44Q5JSH3 913 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 PPFIBP1Q86W92 1011 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 ADGRF2Q8IZF7 708 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 FAM200AQ8TCP9 573 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 SEMA4DQ92854 862 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 KLHL5Q96PQ7 755 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 PI4K2AQ9BTU6 479 aa15.4■□□□□ 0.06
VRK3-213ENST00000597215 OR6C75A6NL08 312 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 PES1O00541 588 aaKnown RBP15.39■□□□□ 0.05
VRK3-213ENST00000597215 TEX28O15482 410 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 FAM163BP0C2L3 166 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 RPL17P18621 184 aaKnown RBP15.39■□□□□ 0.05
VRK3-213ENST00000597215 KLRC2P26717 231 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 NRIP1P48552 1158 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 KRT31Q15323 416 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 DUSP6Q16828 381 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 SOWAHAQ2M3V2 549 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 VWA3BQ502W6 1294 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 SPOPLQ6IQ16 392 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 SCARA5Q6ZMJ2 495 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 LIMS2Q7Z4I7 341 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 RBM23Q86U06 439 aaKnown RBP15.39■□□□□ 0.05
VRK3-213ENST00000597215 THEM5Q8N1Q8 247 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 FAXDC2Q96IV6 333 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 NIF3L1Q9GZT8 377 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 HSD3B7Q9H2F3 369 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 NDST4Q9H3R1 872 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 APOBEC3GQ9HC16 384 aaKnown RBP15.39■□□□□ 0.05
VRK3-213ENST00000597215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.39■□□□□ 0.05
VRK3-213ENST00000597215 TAB2Q9NYJ8 693 aa15.39■□□□□ 0.05
VRK3-213ENST00000597215 POLIQ9UNA4 740 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms