RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 SLC9A1P19634 815 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 ACAT1P24752 427 aaKnown RBP9.98□□□□□ -0.81
ZNF548-206ENST00000597047 KLRC2P26717 231 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 ATICP31939 592 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 USP8P40818 1118 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 MARSP56192 900 aaKnown RBP9.98□□□□□ -0.81
ZNF548-206ENST00000597047 NOP14P78316 857 aaKnown RBP9.98□□□□□ -0.81
ZNF548-206ENST00000597047 CLDN10P78369 228 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 FANCCQ00597 558 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 PLCB3Q01970 1234 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 APBA1Q02410 837 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 ELAVL2Q12926 359 aaKnown RBP9.98□□□□□ -0.81
ZNF548-206ENST00000597047 SMC1AQ14683 1233 aaKnown RBP9.98□□□□□ -0.81
ZNF548-206ENST00000597047 PSMD5Q16401 504 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 PTPROQ16827 1216 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 ARHGAP44Q17R89 818 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 EXOC3L4Q17RC7 722 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 RTP2Q5QGT7 225 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 WSCD1Q658N2 575 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 OVOS1Q6IE37 1185 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 LLGL2Q6P1M3 1020 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 C15orf39Q6ZRI6 1047 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 RRAGAQ7L523 313 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 DPH6Q7L8W6 267 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 GAS2L3Q86XJ1 694 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 PALB2Q86YC2 1186 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 THEM5Q8N1Q8 247 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 APPL2Q8NEU8 664 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 OR6B3Q8NGW1 331 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 SUSD3Q96L08 255 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 HERC2P3Q9BVR0 1158 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 LSM14BQ9BX40 385 aaKnown RBP9.98□□□□□ -0.81
ZNF548-206ENST00000597047 SMYD3Q9H7B4 428 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 IFNKQ9P0W0 207 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 LIMA1Q9UHB6 759 aaKnown RBP9.98□□□□□ -0.81
ZNF548-206ENST00000597047 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
ZNF548-206ENST00000597047 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.98□□□□□ -0.81
ZNF548-206ENST00000597047 RANBP2P49792 3224 aaKnown RBP9.97□□□□□ -0.81
ZNF548-206ENST00000597047 HIDE1A8MVS5 230 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 A8MXQ7 604 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 TMEM189-UBE2V1I3L0A0 370 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 TEX33O43247 280 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 HCRTO43612 131 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 OR4Q2P0C623 313 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 SPATA31D3P0C874 917 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 KLK7P49862 253 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 UBASH3AP57075 661 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 YWHAHQ04917 246 aaPredicted RBP9.97□□□□□ -0.81
ZNF548-206ENST00000597047 ENPEPQ07075 957 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 ORC1Q13415 861 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 GSE1Q14687 1217 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 SKIV2LQ15477 1246 aaKnown RBP9.97□□□□□ -0.81
ZNF548-206ENST00000597047 CTXN3Q4LDR2 81 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 ZNF394Q53GI3 561 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 MIIPQ5JXC2 388 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 VARS2Q5ST30 1063 aaKnown RBP9.97□□□□□ -0.81
ZNF548-206ENST00000597047 GJB7Q6PEY0 223 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.97□□□□□ -0.81
ZNF548-206ENST00000597047 SPATA31D4Q6ZUB0 917 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 GPIHBP1Q8IV16 184 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 ADGRF2Q8IZF7 708 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 PPM1KQ8N3J5 372 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 CXorf38Q8TB03 319 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 NAP1L5Q96NT1 182 aaPredicted RBP9.97□□□□□ -0.81
ZNF548-206ENST00000597047 NT5C1BQ96P26 610 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 MRPL45Q9BRJ2 306 aaKnown RBP9.97□□□□□ -0.81
ZNF548-206ENST00000597047 HSD3B7Q9H2F3 369 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 TLE6Q9H808 572 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 APOBEC3GQ9HC16 384 aaKnown RBP9.97□□□□□ -0.81
ZNF548-206ENST00000597047 UBE2TQ9NPD8 197 aaPredicted RBP9.97□□□□□ -0.81
ZNF548-206ENST00000597047 L1RE1Q9UN81 338 aa9.97□□□□□ -0.81
ZNF548-206ENST00000597047 ARHGEF37A1IGU5 675 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 GOLGA6L3A6NEY3 463 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 H7C4K7 107 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 M0QZQ0 153 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 ASS1P00966 412 aaKnown RBP9.96□□□□□ -0.82
ZNF548-206ENST00000597047 CTSAP10619 480 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 KRT5P13647 590 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 CPB1P15086 417 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 ZNF18P17022 549 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 OR1D2P34982 312 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 GNL1P36915 607 aaPredicted RBP9.96□□□□□ -0.82
ZNF548-206ENST00000597047 NRIP1P48552 1158 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 UBE3AQ05086 875 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 RAPGEF1Q13905 1077 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 SYCP1Q15431 976 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 SOWAHAQ2M3V2 549 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 ADGRD2Q7Z7M1 963 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 OSTM1Q86WC4 334 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 ARHGEF19Q8IW93 802 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 PDCL2Q8N4E4 241 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 LNX1Q8TBB1 728 aaPredicted RBP9.96□□□□□ -0.82
ZNF548-206ENST00000597047 TAF4BQ92750 862 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 PGLYRP2Q96PD5 576 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 TMEM209Q96SK2 561 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 CDX2Q99626 313 aaPredicted RBP9.96□□□□□ -0.82
ZNF548-206ENST00000597047 LPIN3Q9BQK8 851 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 EMILIN2Q9BXX0 1053 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 NIF3L1Q9GZT8 377 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 ZBP1Q9H171 429 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms