RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 TSHZ2Q9NRE2 1034 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 OR6C75A6NL08 312 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 KPNA7A9QM74 516 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 TULP1O00294 542 aaPredicted RBP22.74■■□□□ 1.23
PNKP-209ENST00000596726 DCXO43602 365 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 KIF20AO95235 890 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 TMEM191BP0C7N4 346 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 ALADP13716 330 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 MYBPC2Q14324 1141 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 DUOXA2Q1HG44 320 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 TCEAL8Q8IYN2 117 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 ZDHHC14Q8IZN3 488 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 GUF1Q8N442 669 aaKnown RBP22.74■■□□□ 1.23
PNKP-209ENST00000596726 GZF1Q9H116 711 aaPredicted RBP22.74■■□□□ 1.23
PNKP-209ENST00000596726 PIDD1Q9HB75 910 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 AFF4Q9UHB7 1163 aaKnown RBP22.74■■□□□ 1.23
PNKP-209ENST00000596726 MUTYHQ9UIF7 546 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 DSEQ9UL01 958 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 MAFFQ9ULX9 164 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 TRAF3IP3Q9Y228 551 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 CLUHO75153 1309 aa22.74■■□□□ 1.23
PNKP-209ENST00000596726 EXOC3O60645 756 aa22.73■■□□□ 1.23
PNKP-209ENST00000596726 GADD45BO75293 160 aaPredicted RBP22.73■■□□□ 1.23
PNKP-209ENST00000596726 SEC24AO95486 1093 aa22.73■■□□□ 1.23
PNKP-209ENST00000596726 RBP5P82980 135 aa22.73■■□□□ 1.23
PNKP-209ENST00000596726 ELOA2Q8IYF1 753 aaPredicted RBP22.73■■□□□ 1.23
PNKP-209ENST00000596726 SPATA20Q8TB22 786 aa22.73■■□□□ 1.23
PNKP-209ENST00000596726 CGRRF1Q99675 332 aa22.73■■□□□ 1.23
PNKP-209ENST00000596726 CCL16O15467 120 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 PRPF40AO75400 957 aaKnown RBP22.72■■□□□ 1.23
PNKP-209ENST00000596726 TNNC2P02585 160 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 ELF1P32519 619 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 NFIL3Q16649 462 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 RNF19BQ6ZMZ0 732 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 OTOP3Q7RTS5 596 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 PLCD3Q8N3E9 789 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 TDRD5Q8NAT2 981 aaKnown RBP22.72■■□□□ 1.23
PNKP-209ENST00000596726 GSDMAQ96QA5 445 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 FNBP1Q96RU3 617 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 RTP3Q9BQQ7 232 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 GDAP2Q9NXN4 497 aa22.72■■□□□ 1.23
PNKP-209ENST00000596726 N4BP1O75113 896 aaKnown RBP22.71■■□□□ 1.23
PNKP-209ENST00000596726 XYLBO75191 536 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 VNN2O95498 520 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 NR3C1P04150 777 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 KRT19P08727 400 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 OR4Q2P0C623 313 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 DLATP10515 647 aaKnown RBP22.71■■□□□ 1.23
PNKP-209ENST00000596726 CPB1P15086 417 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 GPR17Q13304 367 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 WSCD1Q658N2 575 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 TRAPPC11Q7Z392 1133 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 GRASPQ7Z6J2 395 aaPredicted RBP22.71■■□□□ 1.23
PNKP-209ENST00000596726 METTL23Q86XA0 190 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 PLEKHO2Q8TD55 490 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 ZNF516Q92618 1163 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 CCDC127Q96BQ5 260 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 ACSF2Q96CM8 615 aaPredicted RBP22.71■■□□□ 1.23
PNKP-209ENST00000596726 CYP4F11Q9HBI6 524 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 MAPK8IP1Q9UQF2 711 aa22.71■■□□□ 1.23
PNKP-209ENST00000596726 CALUO43852 315 aaPredicted RBP22.7■■□□□ 1.22
PNKP-209ENST00000596726 TNNI1P19237 187 aa22.7■■□□□ 1.22
PNKP-209ENST00000596726 CLDN10P78369 228 aa22.7■■□□□ 1.22
PNKP-209ENST00000596726 ADCY1Q08828 1119 aa22.7■■□□□ 1.22
PNKP-209ENST00000596726 OR10T2Q8NGX3 314 aa22.7■■□□□ 1.22
PNKP-209ENST00000596726 PARD3BQ8TEW8 1205 aa22.7■■□□□ 1.22
PNKP-209ENST00000596726 TMEM209Q96SK2 561 aa22.7■■□□□ 1.22
PNKP-209ENST00000596726 C1QTNF1Q9BXJ1 281 aa22.7■■□□□ 1.22
PNKP-209ENST00000596726 RMND1Q9NWS8 449 aa22.7■■□□□ 1.22
PNKP-209ENST00000596726 PCDHA5Q9Y5H7 936 aa22.7■■□□□ 1.22
PNKP-209ENST00000596726 PRRG1O14668 218 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 CASP4P49662 377 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 NTHL1P78549 312 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 BFSP1Q12934 665 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 COBLL1Q53SF7 1204 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 MYADMQ96S97 322 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 ZCWPW1Q9H0M4 648 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 C11orf16Q9NQ32 467 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 DNMT3BQ9UBC3 853 aaKnown RBP22.69■■□□□ 1.22
PNKP-209ENST00000596726 LIMD1Q9UGP4 676 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 HOOK1Q9UJC3 728 aaKnown RBP22.69■■□□□ 1.22
PNKP-209ENST00000596726 L1RE1Q9UN81 338 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 INSL5Q9Y5Q6 135 aa22.69■■□□□ 1.22
PNKP-209ENST00000596726 SMC2O95347 1197 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 CST3P01034 146 aaPredicted RBP22.68■■□□□ 1.22
PNKP-209ENST00000596726 MYO1EQ12965 1108 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 PTPN21Q16825 1174 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 ZCWPW2Q504Y3 356 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 ZNF658Q5TYW1 1059 aaPredicted RBP22.68■■□□□ 1.22
PNKP-209ENST00000596726 LIMS2Q7Z4I7 341 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 SMYD4Q8IYR2 804 aaPredicted RBP22.68■■□□□ 1.22
PNKP-209ENST00000596726 THEM5Q8N1Q8 247 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 TMEM86AQ8N2M4 240 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 PDCL2Q8N4E4 241 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 ERCC4Q92889 916 aaPredicted RBP22.68■■□□□ 1.22
PNKP-209ENST00000596726 SMARCE1Q969G3 411 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 HPDLQ96IR7 371 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 CRISPLD1Q9H336 500 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 HCFC1R1Q9NWW0 138 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 EPS15L1Q9UBC2 864 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms