RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 PAGE5Q96GU1 130 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 NELL2Q99435 816 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 PLA2G2FQ9BZM2 168 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 MRPL44Q9H9J2 332 aaKnown RBP17.33■□□□□ 0.36
USHBP1-205ENST00000595993 MRPS23Q9Y3D9 190 aaKnown RBP17.33■□□□□ 0.36
USHBP1-205ENST00000595993 MED19A0JLT2 244 aaPredicted RBP17.32■□□□□ 0.36
USHBP1-205ENST00000595993 WDR27A2RRH5 827 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 I3L4J1 428 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 LAMTOR5O43504 91 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 LILRB5O75023 590 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 KCNE1P15382 129 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 SCP2P22307 547 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 TARSP26639 723 aaKnown RBP17.32■□□□□ 0.36
USHBP1-205ENST00000595993 BRCC3P46736 316 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 LIG4P49917 911 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 OSTNP61366 133 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 NOLC1Q14978 699 aaKnown RBP eCLIP17.32■□□□□ 0.36
USHBP1-205ENST00000595993 UBXN2BQ14CS0 331 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 SEZ6Q53EL9 994 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 ZBTB41Q5SVQ8 909 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 APBB1IPQ7Z5R6 666 aaPredicted RBP17.32■□□□□ 0.36
USHBP1-205ENST00000595993 TCEAL8Q8IYN2 117 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 ING5Q8WYH8 240 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 DNASE1L2Q92874 299 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 ZMAT2Q96NC0 199 aaKnown RBP17.32■□□□□ 0.36
USHBP1-205ENST00000595993 TCHPQ9BT92 498 aa17.32■□□□□ 0.36
USHBP1-205ENST00000595993 PRMT8Q9NR22 394 aaPredicted RBP17.32■□□□□ 0.36
USHBP1-205ENST00000595993 TOPORSQ9NS56 1045 aaPredicted RBP17.32■□□□□ 0.36
USHBP1-205ENST00000595993 SPATA6Q9NWH7 488 aaPredicted RBP17.32■□□□□ 0.36
USHBP1-205ENST00000595993 ANKRD63C9JTQ0 380 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 HNRNPDLO14979 420 aaKnown RBP17.31■□□□□ 0.36
USHBP1-205ENST00000595993 SYN3O14994 580 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 GCNT3O95395 438 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 ATF2P15336 505 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 CEBPBP17676 345 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 PTPN2P17706 415 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 CD72P21854 359 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 MCL1Q07820 350 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 EHHADHQ08426 723 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 VARS2Q5ST30 1063 aaKnown RBP17.31■□□□□ 0.36
USHBP1-205ENST00000595993 L1TD1Q5T7N2 865 aaKnown RBP17.31■□□□□ 0.36
USHBP1-205ENST00000595993 TPRG1Q6ZUI0 275 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 UNC13DQ70J99 1090 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 DGLUCYQ7Z3D6 616 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 HVCN1Q96D96 273 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 MCRS1Q96EZ8 462 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 EPC1Q9H2F5 836 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 SLC38A7Q9NVC3 462 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 USP25Q9UHP3 1055 aa17.31■□□□□ 0.36
USHBP1-205ENST00000595993 KLRC4O43908 158 aa17.3■□□□□ 0.36
USHBP1-205ENST00000595993 FAM189A1O60320 539 aa17.3■□□□□ 0.36
USHBP1-205ENST00000595993 TANGO2Q6ICL3 276 aa17.3■□□□□ 0.36
USHBP1-205ENST00000595993 MAMSTRQ6ZN01 415 aa17.3■□□□□ 0.36
USHBP1-205ENST00000595993 KRBA2Q6ZNG9 492 aa17.3■□□□□ 0.36
USHBP1-205ENST00000595993 FMR1NBQ8N0W7 255 aaPredicted RBP17.3■□□□□ 0.36
USHBP1-205ENST00000595993 CCDC94Q9BW85 323 aaPredicted RBP17.3■□□□□ 0.36
USHBP1-205ENST00000595993 TRPV5Q9NQA5 729 aa17.3■□□□□ 0.36
USHBP1-205ENST00000595993 ZSCAN32Q9NX65 697 aa17.3■□□□□ 0.36
USHBP1-205ENST00000595993 CNTN3Q9P232 1028 aa17.3■□□□□ 0.36
USHBP1-205ENST00000595993 ANK1P16157 1881 aa17.3■□□□□ 0.36
USHBP1-205ENST00000595993 A0A0B4J269 797 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 PODXLO00592 558 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 CLDN3O15551 220 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 PRPF6O94906 941 aaKnown RBP17.29■□□□□ 0.36
USHBP1-205ENST00000595993 ZNF202O95125 648 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 SEC24AO95486 1093 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 TDGF1P13385 188 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 ABCD1P33897 745 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 TNFSF9P41273 254 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 YARSP54577 528 aaKnown RBP17.29■□□□□ 0.36
USHBP1-205ENST00000595993 CSTF1Q05048 431 aaKnown RBP17.29■□□□□ 0.36
USHBP1-205ENST00000595993 ADCY1Q08828 1119 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 FAM26FQ5R3K3 315 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 TPGS2Q68CL5 300 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 ZNF852Q6ZMS4 543 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 ENGASEQ8NFI3 743 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 HEBP1Q9NRV9 189 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 INSL5Q9Y5Q6 135 aa17.29■□□□□ 0.36
USHBP1-205ENST00000595993 PVALEFA0A1B0GWK0 134 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 NRG2O14511 850 aaPredicted RBP17.28■□□□□ 0.36
USHBP1-205ENST00000595993 NCAM2O15394 837 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 GADD45BO75293 160 aaPredicted RBP17.28■□□□□ 0.36
USHBP1-205ENST00000595993 LRG1P02750 347 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 RPL9P32969 192 aaKnown RBP17.28■□□□□ 0.36
USHBP1-205ENST00000595993 HOXD13P35453 343 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 CCR2P41597 374 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 MATR3P43243 847 aaKnown RBP eCLIP17.28■□□□□ 0.36
USHBP1-205ENST00000595993 EPHA5P54756 1037 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 FAM78AQ5JUQ0 283 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 EPM2AIP1Q7L775 607 aaPredicted RBP17.28■□□□□ 0.36
USHBP1-205ENST00000595993 TCEAL4Q96EI5 215 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 SUSD3Q96L08 255 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 ASB16Q96NS5 453 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 IPO9Q96P70 1041 aaKnown RBP17.28■□□□□ 0.36
USHBP1-205ENST00000595993 ACCSQ96QU6 501 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 HINFPQ9BQA5 517 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 FAM126AQ9BYI3 521 aaPredicted RBP17.28■□□□□ 0.36
USHBP1-205ENST00000595993 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 MAFFQ9ULX9 164 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms