RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 DHX58Q96C10 678 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 TCEAL4Q96EI5 215 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 SAAL1Q96ER3 474 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 TBC1D17Q9HA65 648 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 FAM86C1Q9NVL1 165 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 DSEQ9UL01 958 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 MYH15Q9Y2K3 1946 aa25.39■■□□□ 1.65
LSM4-204ENST00000594828 VNN2O95498 520 aa25.38■■□□□ 1.65
LSM4-204ENST00000594828 TAF6P49848 677 aa25.38■■□□□ 1.65
LSM4-204ENST00000594828 DUSP4Q13115 394 aa25.38■■□□□ 1.65
LSM4-204ENST00000594828 POTEHQ6S545 545 aa25.38■■□□□ 1.65
LSM4-204ENST00000594828 STXBP4Q6ZWJ1 553 aa25.38■■□□□ 1.65
LSM4-204ENST00000594828 HS6ST3Q8IZP7 471 aa25.38■■□□□ 1.65
LSM4-204ENST00000594828 SPRYD3Q8NCJ5 442 aa25.38■■□□□ 1.65
LSM4-204ENST00000594828 ZSWIM2Q8NEG5 633 aa25.38■■□□□ 1.65
LSM4-204ENST00000594828 ANK1P16157 1881 aa25.38■■□□□ 1.65
LSM4-204ENST00000594828 CYB561D2O14569 222 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 ECI2O75521 394 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 CYP11A1P05108 521 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 CCR2P41597 374 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 PLD1Q13393 1074 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 CENPPQ6IPU0 288 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 PHLDB3Q6NSJ2 640 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 METTL23Q86XA0 190 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 BRSK2Q8IWQ3 736 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 LEMD2Q8NC56 503 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 KCNG4Q8TDN1 519 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 PYM1Q9BRP8 204 aaKnown RBP25.37■■□□□ 1.65
LSM4-204ENST00000594828 CBWD1Q9BRT8 395 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 TRIM9Q9C026 710 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 ASAH2Q9NR71 780 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 SLC27A5Q9Y2P5 690 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 YIPF1Q9Y548 306 aa25.37■■□□□ 1.65
LSM4-204ENST00000594828 GOLGA8IPA6NC78 632 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 GOLGA8JA6NMD2 632 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 EXTL3O43909 919 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 MYL4P12829 197 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 ALDH1A3P47895 512 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 TFAMQ00059 246 aaKnown RBP25.36■■□□□ 1.65
LSM4-204ENST00000594828 ATL3Q6DD88 541 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 CCDC105Q8IYK2 499 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 NOC3LQ8WTT2 800 aaKnown RBP25.36■■□□□ 1.65
LSM4-204ENST00000594828 CACTINQ8WUQ7 758 aaKnown RBP25.36■■□□□ 1.65
LSM4-204ENST00000594828 SHDQ96IW2 340 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 TMEM209Q96SK2 561 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 CRISPLD1Q9H336 500 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 PCIF1Q9H4Z3 704 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 RBAKQ9NYW8 714 aaPredicted RBP25.36■■□□□ 1.65
LSM4-204ENST00000594828 GTF3C3Q9Y5Q9 886 aa25.36■■□□□ 1.65
LSM4-204ENST00000594828 MTMR11A4FU01 709 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 KPNA7A9QM74 516 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 ME1P48163 572 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 EPHB3P54753 998 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 EPHA5P54756 1037 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 WNT7BP56706 349 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 ASIC1P78348 528 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 PFKPQ01813 784 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 SNW1Q13573 536 aaKnown RBP25.35■■□□□ 1.65
LSM4-204ENST00000594828 SV2CQ496J9 727 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 TANGO2Q6ICL3 276 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 THEM5Q8N1Q8 247 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 DTWD2Q8NBA8 298 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 ATAD1Q8NBU5 361 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 OR10T2Q8NGX3 314 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 HPS3Q969F9 1004 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 BORCS6Q96GS4 357 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 PLA2G2FQ9BZM2 168 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 CFAP45Q9UL16 551 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 PCDHA7Q9UN72 937 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 SIT1Q9Y3P8 196 aa25.35■■□□□ 1.65
LSM4-204ENST00000594828 POLR2DO15514 142 aaKnown RBP25.34■■□□□ 1.65
LSM4-204ENST00000594828 STARD6P59095 220 aa25.34■■□□□ 1.65
LSM4-204ENST00000594828 PKP1Q13835 747 aa25.34■■□□□ 1.65
LSM4-204ENST00000594828 SLC44A4Q53GD3 710 aa25.34■■□□□ 1.65
LSM4-204ENST00000594828 GLIS3Q8NEA6 775 aa25.34■■□□□ 1.65
LSM4-204ENST00000594828 ELSPBP1Q96BH3 223 aa25.34■■□□□ 1.65
LSM4-204ENST00000594828 ZNF560Q96MR9 790 aa25.34■■□□□ 1.65
LSM4-204ENST00000594828 C7orf25Q9BPX7 421 aa25.34■■□□□ 1.65
LSM4-204ENST00000594828 FAM13BQ9NYF5 915 aa25.34■■□□□ 1.65
LSM4-204ENST00000594828 KIAA0391O15091 583 aaKnown RBP25.33■■□□□ 1.65
LSM4-204ENST00000594828 MOSPD3O75425 235 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 SCN1AP35498 2009 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 PNPLA4P41247 253 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 FAM78AQ5JUQ0 283 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 WSCD1Q658N2 575 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 CNNM4Q6P4Q7 775 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 GPD1LQ8N335 351 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 ZCWPW1Q9H0M4 648 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 MAGEF1Q9HAY2 307 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 ZFP14Q9HCL3 533 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 HSFX1Q9UBD0 423 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 AGAP1Q9UPQ3 857 aa25.33■■□□□ 1.65
LSM4-204ENST00000594828 NRG2O14511 850 aaPredicted RBP25.32■■□□□ 1.64
LSM4-204ENST00000594828 ITGB3P05106 788 aa25.32■■□□□ 1.64
LSM4-204ENST00000594828 GJA1P17302 382 aa25.32■■□□□ 1.64
LSM4-204ENST00000594828 POLR2BP30876 1174 aaKnown RBP25.32■■□□□ 1.64
LSM4-204ENST00000594828 PRKCQQ04759 706 aa25.32■■□□□ 1.64
LSM4-204ENST00000594828 MLF2Q15773 248 aaPredicted RBP25.32■■□□□ 1.64
LSM4-204ENST00000594828 SLC39A12Q504Y0 691 aa25.32■■□□□ 1.64
LSM4-204ENST00000594828 ZSWIM3Q96MP5 696 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms