RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 TBR1Q16650 682 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 PPP4R3BQ5MIZ7 849 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 CAPRIN2Q6IMN6 1127 aaKnown RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 EFCAB12Q6NXP0 572 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 LAYNQ6UX15 382 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 PLPPR4Q7Z2D5 763 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 CCDC60Q8IWA6 550 aaPredicted RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 GPR65Q8IYL9 337 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 IFNL3Q8IZI9 196 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ALLCQ8N6M5 410 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 LINC01465Q8N7H1 131 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 TXNDC5Q8NBS9 432 aaKnown RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 GIMAP8Q8ND71 665 aaPredicted RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 RIN3Q8TB24 985 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 BPIFB1Q8TDL5 484 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 OXER1Q8TDS5 423 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 SLC7A3Q8WY07 619 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 TNPO1Q92973 898 aaKnown RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 CD101Q93033 1021 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 MARVELD3Q96A59 401 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 E2F7Q96AV8 911 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 PGBD4Q96DM1 585 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 MAP7D2Q96T17 732 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 TRAIPQ9BWF2 469 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 LRRCC1Q9C099 1032 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ZDHHC5Q9C0B5 715 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.45□□□□□ -1.86
VRK3-204ENST00000593912 MIR1-1HGQ9H1L0 117 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 CYP4F11Q9HBI6 524 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 JPH1Q9HDC5 661 aaPredicted RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 IL1RAPL2Q9NP60 686 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ASCL3Q9NQ33 180 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ASAH2Q9NR71 780 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 CALCOCO1Q9P1Z2 691 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 KANSL3Q9P2N6 904 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 SLC9A2Q9UBY0 812 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 CYP8B1Q9UNU6 501 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 CLCA2Q9UQC9 943 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 HES2Q9Y543 173 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 PCDHGB2Q9Y5G2 931 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 INSL5Q9Y5Q6 135 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 SLCO1B1Q9Y6L6 691 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 COL1A2P08123 1366 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 CSPG4Q6UVK1 2322 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 COL6A5A8TX70 2615 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 MYO18AQ92614 2054 aaKnown RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 KIF26BQ2KJY2 2108 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 PRRC2CQ9Y520 2896 aaKnown RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 DOCK9Q9BZ29 2069 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 A0A087WZ62 844 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 A0A1B0GTW7 788 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 PMS2P1A4D2B8 440 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 PALM3A6NDB9 673 aaPredicted RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 CASTOR2A6NHX0 329 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 KIAA1324LA8MWY0 1029 aaPredicted RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 K7EQS6 105 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 DDX39AO00148 427 aaKnown RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 BACH1O14867 736 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 KLF8O95600 359 aaPredicted RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 GNAI2P04899 355 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 PRKCGP05129 697 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 CHRM1P11229 460 aaPredicted RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 GNSP15586 552 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 TIE1P35590 1138 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 CD97P48960 835 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 MCM2P49736 904 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 RAB27AP51159 221 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 USP11P51784 963 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 CDR1P51861 262 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 MLLT10P55197 1068 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 SKOR1P84550 965 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 CYP4F8P98187 520 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 PLCB2Q00722 1185 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 INSM1Q01101 510 aaPredicted RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 ROR1Q01973 937 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 SPIRE1Q08AE8 756 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 MESP2Q0VG99 397 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 TWF1Q12792 350 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 CLN3Q13286 438 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 HSP90AA2PQ14568 343 aaPredicted RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 PTPAQ15257 358 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 ZNF484Q5JVG2 852 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 UBXN11Q5T124 520 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 GPATCH4Q5T3I0 446 aaKnown RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 GPR158Q5T848 1215 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 EMC10Q5UCC4 262 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 PCNX4Q63HM2 1172 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 IQCEQ6IPM2 695 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 XKR5Q6UX68 686 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 SLC36A4Q6YBV0 504 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 USP53Q70EK8 1073 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 CATSPER4Q7RTX7 472 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 MRPL10Q7Z7H8 261 aaKnown RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 NLRX1Q86UT6 975 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 ATCAYQ86WG3 371 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 GATAD2AQ86YP4 633 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 WDR63Q8IWG1 891 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 DCBLD1Q8N8Z6 715 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 SMG8Q8ND04 991 aaKnown RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 PI4K2BQ8TCG2 481 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms