RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 USP33Q8TEY7 942 aa13.06□□□□□ -0.32
ZNF558-202ENST00000593891 EZH1Q92800 747 aaPredicted RBP13.06□□□□□ -0.32
ZNF558-202ENST00000593891 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
ZNF558-202ENST00000593891 PHF12Q96QT6 1004 aa13.06□□□□□ -0.32
ZNF558-202ENST00000593891 CEP89Q96ST8 783 aa13.06□□□□□ -0.32
ZNF558-202ENST00000593891 ATXN3LQ9H3M9 355 aa13.06□□□□□ -0.32
ZNF558-202ENST00000593891 CPNE5Q9HCH3 593 aa13.06□□□□□ -0.32
ZNF558-202ENST00000593891 TBX20Q9UMR3 447 aa13.06□□□□□ -0.32
ZNF558-202ENST00000593891 USP9YO00507 2555 aaPredicted RBP13.05□□□□□ -0.32
ZNF558-202ENST00000593891 H7C4K7 107 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 FLRT2O43155 660 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 TSPAN1O60635 241 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 PRAMEF12O95522 483 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 FGF19O95750 216 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 SETQ01105 290 aaPredicted RBP13.05□□□□□ -0.32
ZNF558-202ENST00000593891 GRIK2Q13002 908 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 PLD1Q13393 1074 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 SUZ12Q15022 739 aaKnown RBP13.05□□□□□ -0.32
ZNF558-202ENST00000593891 UGCGQ16739 394 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 TRIM68Q6AZZ1 485 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 CC2D1AQ6P1N0 951 aaPredicted RBP13.05□□□□□ -0.32
ZNF558-202ENST00000593891 TEX2Q8IWB9 1127 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 RGL4Q8IZJ4 473 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 CCDC33Q8N5R6 958 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
ZNF558-202ENST00000593891 PRPF31Q8WWY3 499 aaKnown RBP13.05□□□□□ -0.32
ZNF558-202ENST00000593891 SH2D3AQ9BRG2 576 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 POLR3CQ9BUI4 534 aaPredicted RBP13.05□□□□□ -0.32
ZNF558-202ENST00000593891 CHMP4BQ9H444 224 aaKnown RBP13.05□□□□□ -0.32
ZNF558-202ENST00000593891 TM7SF3Q9NS93 570 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 HSPBP1Q9NZL4 362 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 DDX19BQ9UMR2 479 aa13.05□□□□□ -0.32
ZNF558-202ENST00000593891 PCDH15Q96QU1 1955 aa13.04□□□□□ -0.32
ZNF558-202ENST00000593891 IGLV3-22A0A075B6J6 115 aa13.04□□□□□ -0.32
ZNF558-202ENST00000593891 GJA4P35212 333 aa13.04□□□□□ -0.32
ZNF558-202ENST00000593891 SEC13P55735 322 aa13.04□□□□□ -0.32
ZNF558-202ENST00000593891 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
ZNF558-202ENST00000593891 NAIF1Q69YI7 327 aaPredicted RBP13.04□□□□□ -0.32
ZNF558-202ENST00000593891 CYB5R4Q7L1T6 521 aa13.04□□□□□ -0.32
ZNF558-202ENST00000593891 HEATR3Q7Z4Q2 680 aa13.04□□□□□ -0.32
ZNF558-202ENST00000593891 TICAM2Q86XR7 235 aa13.04□□□□□ -0.32
ZNF558-202ENST00000593891 PSPC1Q8WXF1 523 aaKnown RBP13.04□□□□□ -0.32
ZNF558-202ENST00000593891 LRRC3Q9BY71 257 aa13.04□□□□□ -0.32
ZNF558-202ENST00000593891 TASP1Q9H6P5 420 aa13.04□□□□□ -0.32
ZNF558-202ENST00000593891 AFF4Q9UHB7 1163 aaKnown RBP13.04□□□□□ -0.32
ZNF558-202ENST00000593891 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 MS4A1P11836 297 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 POU3F2P20265 443 aaPredicted RBP13.03□□□□□ -0.32
ZNF558-202ENST00000593891 SFNP31947 248 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 GNAQP50148 359 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 JAK3P52333 1124 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 EPHB3P54753 998 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 LAMTOR4Q0VGL1 99 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 SCRN1Q12765 414 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
ZNF558-202ENST00000593891 PDGFRLQ15198 375 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 EXOC8Q8IYI6 725 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 CPA6Q8N4T0 437 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 ZNF248Q8NDW4 579 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 HMGB4Q8WW32 186 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 PSMG3-AS1Q96PY0 264 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 FZD8Q9H461 694 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 GAREM1Q9H706 876 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 MAN2B2Q9Y2E5 1009 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 PCDHGB2Q9Y5G2 931 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 ADAMTS9Q9P2N4 1935 aa13.03□□□□□ -0.32
ZNF558-202ENST00000593891 TMEM150BA6NC51 233 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 ASAP2O43150 1006 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 NPTXRO95502 500 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 CER1O95813 267 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 ARSAP15289 507 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 VAC14Q08AM6 782 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 MYO1EQ12965 1108 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 TRDNQ13061 729 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 AP3B2Q13367 1082 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 SLC27A1Q6PCB7 646 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 IL27RAQ6UWB1 636 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 DBX2Q6ZNG2 339 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 TRIML1Q8N9V2 468 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 MAP3K14Q99558 947 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 SENP2Q9HC62 589 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 RIC8AQ9NPQ8 531 aa13.02□□□□□ -0.33
ZNF558-202ENST00000593891 MYH9P35579 1960 aaKnown RBP13.01□□□□□ -0.33
ZNF558-202ENST00000593891 I3L4J1 428 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 INO80B-WBP1J3KQ70 363 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 PTGESO14684 152 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 CILPO75339 1184 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 MX1P20591 662 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 GABRR2P28476 465 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 MATKP42679 507 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 MRPS21P82921 87 aaKnown RBP13.01□□□□□ -0.33
ZNF558-202ENST00000593891 PTPRNQ16849 979 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 TBC1D25Q3MII6 688 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 GAREM2Q75VX8 874 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 HSPA12BQ96MM6 686 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 LPIN3Q9BQK8 851 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms