RNA–Protein interactions for RNA: ENST00000593166.1

SLC25A39-217, Transcript of solute carrier family 25 member 39, humanhuman

TSL 3

Gene SLC25A39, Length 797 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-217ENST00000593166 NSUN3Q9H649 340 aaKnown RBP16.78■□□□□ 0.28
SLC25A39-217ENST00000593166 CBX8Q9HC52 389 aa16.78■□□□□ 0.28
SLC25A39-217ENST00000593166 DSEQ9UL01 958 aa16.78■□□□□ 0.28
SLC25A39-217ENST00000593166 PCDHGC5Q9Y5F6 944 aa16.78■□□□□ 0.28
SLC25A39-217ENST00000593166 SNX9Q9Y5X1 595 aa16.78■□□□□ 0.28
SLC25A39-217ENST00000593166 BACE2Q9Y5Z0 518 aa16.78■□□□□ 0.28
SLC25A39-217ENST00000593166 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 HIDE1A8MVS5 230 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 BECN2A8MW95 431 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 OAZ2O95190 189 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 FOSL2P15408 326 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 IGFBP4P22692 258 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 PSMD5Q16401 504 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 HSP90AA4PQ58FG1 418 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 VARS2Q5ST30 1063 aaKnown RBP16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 DPH6Q7L8W6 267 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 CREBRFQ8IUR6 639 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 FAM200AQ8TCP9 573 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 AUTS2Q8WXX7 1259 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 PPP2R3CQ969Q6 453 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 TUBGCP2Q9BSJ2 902 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 TSPY26PQ9H489 355 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 RAB20Q9NX57 234 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 FNIP2Q9P278 1114 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 MTRRQ9UBK8 725 aa16.77■□□□□ 0.28
SLC25A39-217ENST00000593166 H7C4K7 107 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 C2CD2LO14523 706 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 TBC1D4O60343 1298 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 HUS1O60921 280 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 CSPG5O95196 566 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 FAM163BP0C2L3 166 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 PRKCSHP14314 528 aaPredicted RBP16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 TNNC1P63316 161 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 NOP14P78316 857 aaKnown RBP16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 YWHAHQ04917 246 aaPredicted RBP16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 CETN1Q12798 172 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 KRT31Q15323 416 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 WDR72Q3MJ13 1102 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 ZNF667Q5HYK9 610 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 ZNF280DQ6N043 979 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 TMEM86AQ8N2M4 240 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 PDCL2Q8N4E4 241 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 CCDC150Q8NCX0 1101 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 SEMA4DQ92854 862 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 FAXDC2Q96IV6 333 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 EMILIN2Q9BXX0 1053 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 OXCT2Q9BYC2 517 aaPredicted RBP16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 LIMA1Q9UHB6 759 aaKnown RBP16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 L1RE1Q9UN81 338 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 TIMM13Q9Y5L4 95 aaPredicted RBP16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 SZT2Q5T011 3432 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 ATG2AQ2TAZ0 1938 aa16.76■□□□□ 0.27
SLC25A39-217ENST00000593166 GTPBP10A4D1E9 387 aaKnown RBP16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 CNPP09543 421 aaKnown RBP16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 P4HA1P13674 534 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 SOWAHAQ2M3V2 549 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 VWA3BQ502W6 1294 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 TCEAL5Q5H9L2 206 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 MIIPQ5JXC2 388 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 WSCD1Q658N2 575 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 OVOS1Q6IE37 1185 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 ADGRD2Q7Z7M1 963 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 METTL23Q86XA0 190 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 ANKRD20A12PQ8NF67 263 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 KLHL5Q96PQ7 755 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 CDCA3Q99618 268 aaPredicted RBP16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 PI4K2AQ9BTU6 479 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 NIF3L1Q9GZT8 377 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 NDST4Q9H3R1 872 aa16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 APOBEC3GQ9HC16 384 aaKnown RBP16.75■□□□□ 0.27
SLC25A39-217ENST00000593166 FSD2A1L4K1 749 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 LRRC10BA6NIK2 292 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 TEX28O15482 410 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 LRRN2O75325 713 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 TACC1O75410 805 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 C1RP00736 705 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 ADH1AP07327 375 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 CA8P35219 290 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 NDUFV1P49821 464 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 DUSP6Q16828 381 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 CTXN3Q4LDR2 81 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 SPOPLQ6IQ16 392 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 SLC8B1Q6J4K2 584 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 LUZP1Q86V48 1076 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 ADGRF2Q8IZF7 708 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 LMO3Q8TAP4 145 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 CLSTN3Q9BQT9 956 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 TLE6Q9H808 572 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 TAB2Q9NYJ8 693 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 NXF1Q9UBU9 619 aaKnown RBP16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 FBXL5Q9UKA1 691 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 POLIQ9UNA4 740 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 TSC2P49815 1807 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 CDH23Q9H251 3354 aa16.74■□□□□ 0.27
SLC25A39-217ENST00000593166 BRWD1Q9NSI6 2320 aa16.73■□□□□ 0.27
SLC25A39-217ENST00000593166 OR6C75A6NL08 312 aa16.73■□□□□ 0.27
SLC25A39-217ENST00000593166 GABRDO14764 452 aa16.73■□□□□ 0.27
SLC25A39-217ENST00000593166 CLASP2O75122 1294 aaKnown RBP16.73■□□□□ 0.27
SLC25A39-217ENST00000593166 CLSTN1O94985 981 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms