RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 ANKMY2Q8IV38 441 aa13.37□□□□□ -0.27
DNMT1-228ENST00000592705 STKLD1Q8NE28 680 aa13.37□□□□□ -0.27
DNMT1-228ENST00000592705 FAM167BQ9BTA0 163 aa13.37□□□□□ -0.27
DNMT1-228ENST00000592705 MMTAG2Q9BU76 263 aaKnown RBP13.37□□□□□ -0.27
DNMT1-228ENST00000592705 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
DNMT1-228ENST00000592705 BATF3Q9NR55 127 aa13.37□□□□□ -0.27
DNMT1-228ENST00000592705 FBXL21Q9UKT6 434 aa13.37□□□□□ -0.27
DNMT1-228ENST00000592705 AMHP03971 560 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 CCND1P24385 295 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 TMEM62Q0P6H9 643 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SLC29A2Q14542 456 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 LMBRD2Q68DH5 695 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 TRIM67Q6ZTA4 783 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 TMEM199Q8N511 208 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 ZNF512Q96ME7 567 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SENP6Q9GZR1 1112 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SLC40A1Q9NP59 571 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 ARHGAP20Q9P2F6 1191 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 GGT7Q9UJ14 662 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SLC4A7Q9Y6M7 1214 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SMAPO00193 183 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 APOL1O14791 398 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 DDR1Q08345 913 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 CAPRIN2Q6IMN6 1127 aaKnown RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 LRRN4CLQ8ND94 238 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 C9orf72Q96LT7 481 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SERPINB12Q96P63 405 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 ZSWIM1Q9BR11 485 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 OSBPL1AQ9BXW6 950 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SLC13A1Q9BZW2 595 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 PRG3Q9Y2Y8 225 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 A0A0A6YYK5 440 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 HOXC6P09630 235 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 MAPK7Q13164 816 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 GJB7Q6PEY0 223 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 RGS9BPQ6ZS82 235 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 TRIML2Q8N7C3 387 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 APPL2Q8NEU8 664 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 MXRA8Q9BRK3 442 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 OSBPL8Q9BZF1 889 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 YIPF3Q9GZM5 350 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 GNGT2O14610 69 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 RFC5P40937 340 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 CASP2P42575 452 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 ITGA8P53708 1063 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 MEI1Q5TIA1 1274 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 MYCBPAPQ8TBZ2 947 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 AKT1S1Q96B36 256 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 GAS2L1Q99501 681 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 MTG1Q9BT17 334 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 GTF3C4Q9UKN8 822 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SH3BP1Q9Y3L3 701 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 ORC6Q9Y5N6 252 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 FAM205AQ6ZU69 1335 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 CHEK2O96017 543 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 HNRNPH1P31943 449 aaKnown RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 MAGEA4P43358 317 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 NECAB2Q7Z6G3 386 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SLC13A5Q86YT5 568 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 ARHGAP18Q8N392 663 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 SCG3Q8WXD2 468 aaKnown RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 C18orf8Q96DM3 657 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 AGPAT3Q9NRZ7 376 aa13.36□□□□□ -0.27
DNMT1-228ENST00000592705 FAM217BQ9NTX9 383 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-228ENST00000592705 CABYRO75952 493 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 PPIL2Q13356 520 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 RBBP8NLQ8NC74 664 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-228ENST00000592705 ARL8AQ96BM9 186 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 THAP2Q9H0W7 228 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 MUTP22033 750 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 GRIK1P39086 918 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 OCRLQ01968 901 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 KYNUQ16719 465 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 RASSF3Q86WH2 238 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 TSSK1BQ9BXA7 367 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 SPATC1LQ9H0A9 340 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 DIAPH2O60879 1101 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 PGM1P36871 562 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 TEDDM1Q5T9Z0 273 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 RANBP17Q9H2T7 1088 aaKnown RBP13.35□□□□□ -0.27
DNMT1-228ENST00000592705 KLHL11Q9NVR0 708 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
DNMT1-228ENST00000592705 MSH4O15457 936 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 KLRK1P26718 216 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
DNMT1-228ENST00000592705 LRRC23Q53EV4 343 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-228ENST00000592705 BFARQ9NZS9 450 aa13.35□□□□□ -0.27
DNMT1-228ENST00000592705 DMGDHQ9UI17 866 aaKnown RBP13.35□□□□□ -0.27
DNMT1-228ENST00000592705 RASSF10A6NK89 507 aa13.34□□□□□ -0.27
DNMT1-228ENST00000592705 GSTA4O15217 222 aa13.34□□□□□ -0.27
DNMT1-228ENST00000592705 BTG3Q14201 252 aaPredicted RBP13.34□□□□□ -0.27
DNMT1-228ENST00000592705 ADGRA1Q86SQ6 560 aa13.34□□□□□ -0.27
DNMT1-228ENST00000592705 LONP2Q86WA8 852 aa13.34□□□□□ -0.27
DNMT1-228ENST00000592705 TJP2Q9UDY2 1190 aa13.34□□□□□ -0.27
DNMT1-228ENST00000592705 MED24O75448 989 aa13.34□□□□□ -0.27
DNMT1-228ENST00000592705 CD4P01730 458 aa13.34□□□□□ -0.27
DNMT1-228ENST00000592705 PGK2P07205 417 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms