RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 FBXW11Q9UKB1 542 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 C5orf42Q9H799 3197 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 SPTLC1O15269 473 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 CCL16O15467 120 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 GADD45BO75293 160 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-227ENST00000591849 OAZ2O95190 189 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 KRT13P13646 458 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 ALADP13716 330 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 GBP2P32456 591 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-227ENST00000591849 WNT7BP56706 349 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 UBE2HP62256 183 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 BIRC3Q13489 604 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 SNW1Q13573 536 aaKnown RBP10.85□□□□□ -0.67
BRCA1-227ENST00000591849 SLC8B1Q6J4K2 584 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 RSPO2Q6UXX9 243 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-227ENST00000591849 OTOP3Q7RTS5 596 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 ELMOD1Q8N336 334 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 PLCD3Q8N3E9 789 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 LRRC52Q8N7C0 313 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 C1orf127Q8N9H9 656 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 TDRD5Q8NAT2 981 aaKnown RBP10.85□□□□□ -0.67
BRCA1-227ENST00000591849 KCTD10Q9H3F6 313 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 PCDHA5Q9Y5H7 936 aa10.85□□□□□ -0.67
BRCA1-227ENST00000591849 ZNF318Q5VUA4 2279 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 WDR27A2RRH5 827 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 NR2F2P24468 414 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 AARSP49588 968 aaKnown RBP eCLIP10.84□□□□□ -0.67
BRCA1-227ENST00000591849 AP3M2P53677 418 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 TSPY1Q01534 308 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 ADCY1Q08828 1119 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 ADAM9Q13443 819 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 MYBPC2Q14324 1141 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 ZNF658Q5TYW1 1059 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-227ENST00000591849 WSCD1Q658N2 575 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 ISM2Q6H9L7 571 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 IQCEQ6IPM2 695 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 RTL10Q7L3V2 364 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 TRAPPC11Q7Z392 1133 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 RNF135Q8IUD6 432 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 SLC9A9Q8IVB4 645 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 SMYD4Q8IYR2 804 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-227ENST00000591849 DCP1BQ8IZD4 617 aaKnown RBP10.84□□□□□ -0.67
BRCA1-227ENST00000591849 OR5B17Q8NGF7 314 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 ERCC4Q92889 916 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-227ENST00000591849 HPDLQ96IR7 371 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 MFSD14AQ96MC6 490 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 ZNF512Q96ME7 567 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-227ENST00000591849 MMS19Q96T76 1030 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 LRFN3Q9BTN0 628 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 WDR6Q9NNW5 1121 aaKnown RBP10.84□□□□□ -0.67
BRCA1-227ENST00000591849 CD320Q9NPF0 282 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 AFF4Q9UHB7 1163 aaKnown RBP10.84□□□□□ -0.67
BRCA1-227ENST00000591849 MAFFQ9ULX9 164 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 TRAF3IP3Q9Y228 551 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 SNX9Q9Y5X1 595 aa10.84□□□□□ -0.67
BRCA1-227ENST00000591849 C2CD4DB7Z1M9 353 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 LOC730098B7Z3J9 87 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 CETN3O15182 167 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 DCXO43602 365 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 TBC1D4O60343 1298 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 GPR37L1O60883 481 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 ABLIM3O94929 683 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 CYP11A1P05108 521 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 OR4Q2P0C623 313 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 ATF2P15336 505 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 FSHRP23945 695 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 HOXA9P31269 272 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 PSMC2P35998 433 aaKnown RBP10.83□□□□□ -0.68
BRCA1-227ENST00000591849 ALDH1A3P47895 512 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 TNNC1P63316 161 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 MYL7Q01449 175 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 PLD1Q13393 1074 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 TAF12Q16514 161 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 RNF19BQ6ZMZ0 732 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 GET4Q7L5D6 327 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-227ENST00000591849 GRASPQ7Z6J2 395 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-227ENST00000591849 ELOA2Q8IYF1 753 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-227ENST00000591849 TCEAL8Q8IYN2 117 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 TMEM86AQ8N2M4 240 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 FAM200AQ8TCP9 573 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 ZNF707Q96C28 371 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-227ENST00000591849 FAM84AQ96KN4 292 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 IPO9Q96P70 1041 aaKnown RBP10.83□□□□□ -0.68
BRCA1-227ENST00000591849 PGLYRP2Q96PD5 576 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 SNX25Q9H3E2 840 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 EPHX3Q9H6B9 360 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 DMAC2Q9NW81 257 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 LIMD1Q9UGP4 676 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 USTQ9Y2C2 406 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 CLUHO75153 1309 aa10.83□□□□□ -0.68
BRCA1-227ENST00000591849 CITO14578 2027 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 TRIOO75962 3097 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 PI4K2BG5E9Z4 385 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 GOLGA6L22H0YM25 854 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 PSMA7O14818 248 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 SEC24AO95486 1093 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 EPB41P11171 864 aaKnown RBP10.82□□□□□ -0.68
BRCA1-227ENST00000591849 PTPN2P17706 415 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 PPP1R2P41236 205 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms