RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 TAF2Q6P1X5 1199 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 CATSPER4Q7RTX7 472 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 RHOT1Q8IXI2 618 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 HDAC7Q8WUI4 952 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 CPA5Q8WXQ8 436 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 SETD4Q9NVD3 440 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 SMARCAL1Q9NZC9 954 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 PARP2Q9UGN5 583 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 PCYOX1Q9UHG3 505 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 HPCAL4Q9UM19 191 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
VPS25-206ENST00000591584 C17orf102A2RUQ5 167 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 FSCN2O14926 492 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 TLR3O15455 904 aaKnown RBP11.04□□□□□ -0.64
VPS25-206ENST00000591584 CA12O43570 354 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 HSF2BPO75031 334 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 PHF2O75151 1096 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 FAM163BP0C2L3 166 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 VDRP11473 427 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 DARSP14868 501 aaKnown RBP11.04□□□□□ -0.64
VPS25-206ENST00000591584 FNTAP49354 379 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 FCGRTP55899 365 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 OSTNP61366 133 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 NKX3-2P78367 333 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 ADAM17P78536 824 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 SLC7A5Q01650 507 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 MAMLD1Q13495 774 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 PIGHQ14442 188 aaPredicted RBP11.04□□□□□ -0.64
VPS25-206ENST00000591584 WDR72Q3MJ13 1102 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 MFSD14CQ5VZR4 134 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 JADE1Q6IE81 842 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 SYDE1Q6ZW31 735 aaPredicted RBP11.04□□□□□ -0.64
VPS25-206ENST00000591584 ILDR2Q71H61 639 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 SND1Q7KZF4 910 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS25-206ENST00000591584 ERICH1Q86X53 443 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 SLC13A5Q86YT5 568 aaPredicted RBP11.04□□□□□ -0.64
VPS25-206ENST00000591584 C1orf127Q8N9H9 656 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 C12orf50Q8NA57 414 aaPredicted RBP11.04□□□□□ -0.64
VPS25-206ENST00000591584 BEST2Q8NFU1 509 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 ALG3Q92685 438 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 KAT2BQ92831 832 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 AP1M1Q9BXS5 423 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 SPC25Q9HBM1 224 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 DPP3Q9NY33 737 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 SIX4Q9UIU6 781 aa11.04□□□□□ -0.64
VPS25-206ENST00000591584 BARX2Q9UMQ3 279 aaPredicted RBP11.04□□□□□ -0.64
VPS25-206ENST00000591584 A6NNZ2 444 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 TMEM110-MUSTN1A8MSY1 372 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 ZMYND10O75800 440 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 CD4P01730 458 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 HMGCRP04035 888 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 ITGB3P05106 788 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 NFICP08651 508 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 CYP2B6P20813 491 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 CYP3A5P20815 502 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 OAS2P29728 719 aaKnown RBP11.03□□□□□ -0.64
VPS25-206ENST00000591584 CRYBB1P53674 252 aaPredicted RBP11.03□□□□□ -0.64
VPS25-206ENST00000591584 COPS2P61201 443 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 DR1Q01658 176 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 MTMR3Q13615 1198 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 ZNF268Q14587 947 aaPredicted RBP11.03□□□□□ -0.64
VPS25-206ENST00000591584 ACAP1Q15027 740 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 CNGA2Q16280 664 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 TUBB8Q3ZCM7 444 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 DCAF12L1Q5VU92 463 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 RCOR2Q8IZ40 523 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 LRRC52Q8N7C0 313 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 CEP120Q8N960 986 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 C3orf20Q8ND61 904 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 C1orf131Q8NDD1 294 aaKnown RBP11.03□□□□□ -0.64
VPS25-206ENST00000591584 CXorf38Q8TB03 319 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 FNIP1Q8TF40 1166 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 IFT81Q8WYA0 676 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 SLCO2A1Q92959 643 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 TMEM176AQ96HP8 235 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 HPDLQ96IR7 371 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 CPB2Q96IY4 423 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 RUFY1Q96T51 708 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 C11orf70Q9BRQ4 267 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 LRRC19Q9H756 370 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 NMRK2Q9NPI5 230 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 PSD3Q9NYI0 1048 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 NXF1Q9UBU9 619 aaKnown RBP11.03□□□□□ -0.64
VPS25-206ENST00000591584 UBQLN1Q9UMX0 589 aaKnown RBP11.03□□□□□ -0.64
VPS25-206ENST00000591584 AGAP1Q9UPQ3 857 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 UMODL1Q5DID0 1318 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 PASKQ96RG2 1323 aa11.03□□□□□ -0.64
VPS25-206ENST00000591584 GOLGA6BA6NDN3 693 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 TMEM191CA6NGB0 347 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 GOLGA8KD6RF30 607 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 NDC80O14777 642 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 CILPO75339 1184 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 MYL3P08590 195 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 WEE2P0C1S8 567 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 PYGMP11217 842 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 CD58P19256 250 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 HOXA11P31270 313 aaPredicted RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 HOXC8P31273 242 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 PNPLA4P41247 253 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 CARSP49589 748 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms