RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 KIF26AQ9ULI4 1882 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-216ENST00000591275 M0QZQ0 153 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 DPYSL4O14531 572 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 AXIN1O15169 862 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 SOAT2O75908 522 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 OAZ2O95190 189 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 CXCL8P10145 99 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 PXNP49023 591 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-216ENST00000591275 PLD1Q13393 1074 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 NOLC1Q14978 699 aaKnown RBP eCLIP17.34■□□□□ 0.37
DDX39A-216ENST00000591275 RALGPS2Q86X27 583 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-216ENST00000591275 TTC9BQ8N6N2 239 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 C4orf32Q8N8J7 132 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 C8orf76Q96K31 380 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 DRC1Q96MC2 740 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 MKNK1Q9BUB5 465 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 ARRDC1-AS1Q9H2J1 176 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 ATXN3LQ9H3M9 355 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 PPP4R2Q9NY27 417 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 DNM3Q9UQ16 869 aa17.34■□□□□ 0.37
DDX39A-216ENST00000591275 RBM19Q9Y4C8 960 aaKnown RBP17.34■□□□□ 0.37
DDX39A-216ENST00000591275 ATG2BQ96BY7 2078 aa17.33■□□□□ 0.37
DDX39A-216ENST00000591275 GREB1Q4ZG55 1949 aa17.33■□□□□ 0.37
DDX39A-216ENST00000591275 PP2D1A8MPX8 630 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 ALDH1A3P47895 512 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 CDR1P51861 262 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 NEK4P51957 841 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 TNK2Q07912 1038 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 RAD51AP2Q09MP3 1159 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 STRN3Q13033 797 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 GPR158Q5T848 1215 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 N4BP2L1Q5TBK1 243 aaPredicted RBP17.33■□□□□ 0.36
DDX39A-216ENST00000591275 RINT1Q6NUQ1 792 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 GAREM2Q75VX8 874 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 USP37Q86T82 979 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 WDR5BQ86VZ2 330 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 ATAD1Q8NBU5 361 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 KIF12Q96FN5 646 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 RXFP3Q9NSD7 469 aa17.33■□□□□ 0.36
DDX39A-216ENST00000591275 EXTL3O43909 919 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 FOXD2O60548 495 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-216ENST00000591275 TOM1L1O75674 476 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 PRAMEF12O95522 483 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 GABRR2P28476 465 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 CDC25AP30304 524 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 MATR3P43243 847 aaKnown RBP eCLIP17.32■□□□□ 0.36
DDX39A-216ENST00000591275 GUCY2FP51841 1108 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 GPR17Q13304 367 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 GNL2Q13823 731 aaKnown RBP17.32■□□□□ 0.36
DDX39A-216ENST00000591275 CCINQ13939 588 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 ARHGAP29Q52LW3 1261 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 CENPPQ6IPU0 288 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 PKN3Q6P5Z2 889 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 DSTYKQ6XUX3 929 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 KCNK18Q7Z418 384 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 HAUS6Q7Z4H7 955 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 DNAJB7Q7Z6W7 309 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-216ENST00000591275 DDX1Q92499 740 aaKnown RBP17.32■□□□□ 0.36
DDX39A-216ENST00000591275 FOXP1Q9H334 677 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-216ENST00000591275 RALYQ9UKM9 306 aaKnown RBP17.32■□□□□ 0.36
DDX39A-216ENST00000591275 ANGPTL2Q9UKU9 493 aa17.32■□□□□ 0.36
DDX39A-216ENST00000591275 NUP210Q8TEM1 1887 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-216ENST00000591275 FAM208BQ5VWN6 2430 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 MTMR11A4FU01 709 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 OR6C75A6NL08 312 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 OVOS1Q6IE37 1185 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 C1orf186Q6ZWK4 172 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 IGSF22Q8N9C0 903 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 C12orf50Q8NA57 414 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-216ENST00000591275 PSMG2Q969U7 264 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 TMEM209Q96SK2 561 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 HAPLN2Q9GZV7 340 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 SMG9Q9H0W8 520 aaKnown RBP17.31■□□□□ 0.36
DDX39A-216ENST00000591275 SMOC1Q9H4F8 434 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 MYH11P35749 1972 aa17.31■□□□□ 0.36
DDX39A-216ENST00000591275 PPEF2O14830 753 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 CLDN3O15551 220 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 RPP40O75818 363 aaKnown RBP17.3■□□□□ 0.36
DDX39A-216ENST00000591275 LRPAP1P30533 357 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 HOXA6P31267 233 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 TNFSF9P41273 254 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 AARSP49588 968 aaKnown RBP eCLIP17.3■□□□□ 0.362e-6■■■■■ 30.9
DDX39A-216ENST00000591275 CYP4F8P98187 520 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 CACNB1Q02641 598 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-216ENST00000591275 PDIA5Q14554 519 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 ZRSR1Q15695 479 aaKnown RBP17.3■□□□□ 0.36
DDX39A-216ENST00000591275 ARHGAP15Q53QZ3 475 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 KRT79Q5XKE5 535 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 KBTBD6Q86V97 674 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 TMEM161BQ8NDZ6 487 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 BPIFB1Q8TDL5 484 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 LPIN3Q9BQK8 851 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 OXCT2Q9BYC2 517 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-216ENST00000591275 C17orf75Q9HAS0 396 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 ASB3Q9Y575 518 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 IGF2RP11717 2491 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 ATRXP46100 2492 aa17.3■□□□□ 0.36
DDX39A-216ENST00000591275 TTC26A0AVF1 554 aa17.29■□□□□ 0.36
DDX39A-216ENST00000591275 CLTAP09496 248 aa17.29■□□□□ 0.36
DDX39A-216ENST00000591275 ZNF806P0C7X5 589 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms