RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TYRO3Q06418 890 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 SKOR2Q2VWA4 1001 aaPredicted RBP23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 BEST2Q8NFU1 509 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 CXorf38Q8TB03 319 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 PARD3BQ8TEW8 1205 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 TSPAN18Q96SJ8 248 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 CGRRF1Q99675 332 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 COLEC11Q9BWP8 271 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 ZBP1Q9H171 429 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 INTS13Q9NVM9 706 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 DPP3Q9NY33 737 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 IRAK3Q9Y616 596 aa23.18■■□□□ 1.3
R3HDM4-206ENST00000590454 SYCE3A1L190 88 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 CARNS1A5YM72 827 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 EPCAMP16422 314 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 LRPAP1P30533 357 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 CSGALNACT2Q8N6G5 542 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 C1orf127Q8N9H9 656 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 B3GALT6Q96L58 329 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 UROC1Q96N76 676 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 RTP3Q9BQQ7 232 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 GPR62Q9BZJ7 368 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 SIX4Q9UIU6 781 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 ADAM28Q9UKQ2 775 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 MYO15AQ9UKN7 3530 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 MYO10Q9HD67 2058 aa23.17■■□□□ 1.3
R3HDM4-206ENST00000590454 I3L4J1 428 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 MAPK13O15264 365 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 PI15O43692 258 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 B3GAT3O94766 335 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 TRIM49P0CI25 452 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 TRIM49CP0CI26 452 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 CTSAP10619 480 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 TNNI1P19237 187 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 BRCC3P46736 316 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 TDGQ13569 410 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 SURF1Q15526 300 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 STX1AQ16623 288 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 C9orf57Q5W0N0 161 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 DCLRE1AQ6PJP8 1040 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 FOXR2Q6PJQ5 311 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 OTOP3Q7RTS5 596 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 DDX53Q86TM3 631 aaKnown RBP23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 WDR49Q8IV35 697 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 CCDC105Q8IYK2 499 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 SLC22A17Q8WUG5 538 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 DDX27Q96GQ7 796 aaKnown RBP23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 FNBP1Q96RU3 617 aa23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 SRRTQ9BXP5 876 aaKnown RBP23.16■■□□□ 1.3
R3HDM4-206ENST00000590454 SCN1AP35498 2009 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 ANO9A1A5B4 782 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 PIRO00625 290 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 SLC16A3O15427 465 aaKnown RBP23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 XPOTO43592 962 aaKnown RBP23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 TADA2AO75478 443 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 NPR3P17342 541 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 RPL9P32969 192 aaKnown RBP23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 VAMP7P51809 220 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 CLDN10P78369 228 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 ANGPT1Q15389 498 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 FUT10Q6P4F1 479 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 TMC5Q6UXY8 1006 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 PPFIBP1Q86W92 1011 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 NT5DC4Q86YG4 428 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 TMC2Q8TDI7 906 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 AUTS2Q8WXX7 1259 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 FUCA2Q9BTY2 467 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 MKNK1Q9BUB5 465 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 DNAJC25Q9H1X3 360 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 ANO10Q9NW15 660 aa23.15■■□□□ 1.3
R3HDM4-206ENST00000590454 TMEM189-UBE2V1I3L0A0 370 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 SPTLC1O15269 473 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 ITGB3P05106 788 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 TMEM191BP0C7N4 346 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 EPB41P11171 864 aaKnown RBP23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 ERCC5P28715 1186 aaPredicted RBP23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 POLR2BP30876 1174 aaKnown RBP23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 DUOXA2Q1HG44 320 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 ZSCAN23Q3MJ62 389 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 CCDC149Q6ZUS6 474 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 FILIP1Q7Z7B0 1213 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 GPR149Q86SP6 731 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 RNF168Q8IYW5 571 aaPredicted RBP23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 DTWD2Q8NBA8 298 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 CACTINQ8WUQ7 758 aaKnown RBP23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 CEP63Q96MT8 703 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 SFXN1Q9H9B4 322 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 DACH1Q9UI36 760 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 FBXL21Q9UKT6 434 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 DUSP12Q9UNI6 340 aa23.14■■□□□ 1.29
R3HDM4-206ENST00000590454 MCCD1P59942 119 aaPredicted RBP23.13■■□□□ 1.29
R3HDM4-206ENST00000590454 PPP3CAQ08209 521 aa23.13■■□□□ 1.29
R3HDM4-206ENST00000590454 BFSP1Q12934 665 aa23.13■■□□□ 1.29
R3HDM4-206ENST00000590454 INTS8Q75QN2 995 aaKnown RBP23.13■■□□□ 1.29
R3HDM4-206ENST00000590454 TRAPPC11Q7Z392 1133 aa23.13■■□□□ 1.29
R3HDM4-206ENST00000590454 IRF2BP1Q8IU81 584 aa23.13■■□□□ 1.29
R3HDM4-206ENST00000590454 ANKRD36BP1Q96IX9 119 aa23.13■■□□□ 1.29
R3HDM4-206ENST00000590454 AGAP1Q9UPQ3 857 aa23.13■■□□□ 1.29
R3HDM4-206ENST00000590454 SPDYE4A6NLX3 237 aa23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 CST3P01034 146 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms