RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 EPOPA6NHQ4 379 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 I3L4J1 428 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 PES1O00541 588 aaKnown RBP12.93□□□□□ -0.34
APOC1-206ENST00000590334 TEX33O43247 280 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 HUS1O60921 280 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 TACC1O75410 805 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 DNAJB1P25685 340 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 ASPAP45381 313 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 UBASH3AP57075 661 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 TNNC1P63316 161 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 DSG1Q02413 1049 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 UBXN1Q04323 297 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 GPM6BQ13491 265 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 CAMK1Q14012 370 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 MRPL58Q14197 206 aaKnown RBP12.93□□□□□ -0.34
APOC1-206ENST00000590334 HABP4Q5JVS0 413 aaKnown RBP12.93□□□□□ -0.34
APOC1-206ENST00000590334 FAM171A1Q5VUB5 890 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 KIAA0319Q5VV43 1072 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 PHLDB3Q6NSJ2 640 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 VPS52Q8N1B4 723 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 TMEM86AQ8N2M4 240 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 APPL2Q8NEU8 664 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 POF1BQ8WVV4 589 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 ARNTL2Q8WYA1 636 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 TATDN2Q93075 761 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 CRACR2AQ9BSW2 395 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 TTPALQ9BTX7 342 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 NIF3L1Q9GZT8 377 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 ZBP1Q9H171 429 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 TTYH1Q9H313 450 aaPredicted RBP12.93□□□□□ -0.34
APOC1-206ENST00000590334 CERS4Q9HA82 394 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 ALG13Q9NP73 1137 aaKnown RBP12.93□□□□□ -0.34
APOC1-206ENST00000590334 SIX2Q9NPC8 291 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 IFNKQ9P0W0 207 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 L1RE1Q9UN81 338 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 PTPRDP23468 1912 aa12.93□□□□□ -0.34
APOC1-206ENST00000590334 A0A1W2PQC6 194 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 GABRDO14764 452 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 FSCN2O14926 492 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 GRM6O15303 877 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 AP5Z1O43299 807 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 TBC1D4O60343 1298 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 LPXNO60711 386 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 LILRB3O75022 631 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 OAZ2O95190 189 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 CTSAP10619 480 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 TKTP29401 623 aaKnown RBP12.92□□□□□ -0.34
APOC1-206ENST00000590334 PBX1P40424 430 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 GLUD2P49448 558 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 GCNT1Q02742 428 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 RTP2Q5QGT7 225 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
APOC1-206ENST00000590334 PDXDC1Q6P996 788 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 PDCL2Q8N4E4 241 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 KBTBD7Q8WVZ9 684 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 PIK3R5Q8WYR1 880 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 JAKMIP2Q96AA8 810 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 ELMO3Q96BJ8 720 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 LRCH3Q96II8 777 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 FAM81BQ96LP2 452 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 NT5C1BQ96P26 610 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 OXCT2Q9BYC2 517 aaPredicted RBP12.92□□□□□ -0.34
APOC1-206ENST00000590334 CYP3A43Q9HB55 503 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 TLR9Q9NR96 1032 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 NXF1Q9UBU9 619 aaKnown RBP12.92□□□□□ -0.34
APOC1-206ENST00000590334 APEX2Q9UBZ4 518 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 POLIQ9UNA4 740 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 SSX2IPQ9Y2D8 614 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 DAAM1Q9Y4D1 1078 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 IRAK3Q9Y616 596 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 TRIOBPQ9H2D6 2365 aa12.92□□□□□ -0.34
APOC1-206ENST00000590334 CBFA2T2O43439 604 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 RFX1P22670 979 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 WARSP23381 471 aaKnown RBP12.91□□□□□ -0.34
APOC1-206ENST00000590334 TBXAS1P24557 533 aaPredicted RBP12.91□□□□□ -0.34
APOC1-206ENST00000590334 ERVFC1P60507 584 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 YWHAHQ04917 246 aaPredicted RBP12.91□□□□□ -0.34
APOC1-206ENST00000590334 INCA1Q0VD86 236 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 CUL2Q13617 745 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 SYCP1Q15431 976 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
APOC1-206ENST00000590334 KLHDC7AQ5VTJ3 777 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 WSCD1Q658N2 575 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 ANKS3Q6ZW76 656 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 ENOSF1Q7L5Y1 443 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 METTL23Q86XA0 190 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 ARHGEF19Q8IW93 802 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 ADGRF2Q8IZF7 708 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 TTC39CQ8N584 583 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 UBR7Q8N806 425 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 LNX1Q8TBB1 728 aaPredicted RBP12.91□□□□□ -0.34
APOC1-206ENST00000590334 GDPD5Q8WTR4 605 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 MMS19Q96T76 1030 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 XPO4Q9C0E2 1151 aaKnown RBP12.91□□□□□ -0.34
APOC1-206ENST00000590334 SDCBP2Q9H190 292 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 SMYD3Q9H7B4 428 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 NGRNQ9NPE2 291 aaKnown RBP12.91□□□□□ -0.34
APOC1-206ENST00000590334 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.91□□□□□ -0.34
APOC1-206ENST00000590334 MTRRQ9UBK8 725 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms