RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 CDKAL1Q5VV42 579 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 ZNF280DQ6N043 979 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 CD300LGQ6UXG3 332 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 EP400NLQ6ZTU2 488 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 RBM23Q86U06 439 aaKnown RBP13.81□□□□□ -0.2
DDX39A-213ENST00000590315 PPM1EQ8WY54 764 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 CDX2Q99626 313 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-213ENST00000590315 EMILIN2Q9BXX0 1053 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 IGFLR1Q9H665 355 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 NGRNQ9NPE2 291 aaKnown RBP13.81□□□□□ -0.2
DDX39A-213ENST00000590315 RAB20Q9NX57 234 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 GCNT4Q9P109 453 aa13.81□□□□□ -0.2
DDX39A-213ENST00000590315 H7C4K7 107 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 SERPINC1P01008 464 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 RPL17P18621 184 aaKnown RBP13.8□□□□□ -0.2
DDX39A-213ENST00000590315 FGFR3P22607 806 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 RAP1GAPP47736 663 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 ZNF445P59923 1031 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 DSG1Q02413 1049 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 NCAPHQ15003 741 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 IQCB1Q15051 598 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 PTPN14Q15678 1187 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 CTXN3Q4LDR2 81 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 VWA3BQ502W6 1294 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 FKBP15Q5T1M5 1219 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 WSCD1Q658N2 575 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 OVOS1Q6IE37 1185 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 PDE12Q6L8Q7 609 aaKnown RBP13.8□□□□□ -0.2
DDX39A-213ENST00000590315 PDXDC1Q6P996 788 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 C15orf39Q6ZRI6 1047 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 ANKS3Q6ZW76 656 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 ADGRF2Q8IZF7 708 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 THEM5Q8N1Q8 247 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-213ENST00000590315 CRACR2AQ9BSW2 395 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 ANP32EQ9BTT0 268 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 NSUN3Q9H649 340 aaKnown RBP13.8□□□□□ -0.2
DDX39A-213ENST00000590315 TLE6Q9H808 572 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 DSEQ9UL01 958 aa13.8□□□□□ -0.2
DDX39A-213ENST00000590315 PRRC2BQ5JSZ5 2229 aaKnown RBP13.8□□□□□ -0.2
DDX39A-213ENST00000590315 C2orf71A6NGG8 1288 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 HIDE1A8MVS5 230 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 M0QZQ0 153 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 ATP1A3P13637 1013 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 CPB1P15086 417 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 KLRC2P26717 231 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 NRIP1P48552 1158 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 AARSP49588 968 aaKnown RBP eCLIP13.79□□□□□ -0.2
DDX39A-213ENST00000590315 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
DDX39A-213ENST00000590315 CREMQ03060 361 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 ADGRE1Q14246 886 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 SKIV2LQ15477 1246 aaKnown RBP13.79□□□□□ -0.2
DDX39A-213ENST00000590315 CCDC85BQ15834 202 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-213ENST00000590315 FILIP1LQ4L180 1135 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 LLGL2Q6P1M3 1020 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 GBP6Q6ZN66 633 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 ADGRD2Q7Z7M1 963 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 RNF168Q8IYW5 571 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-213ENST00000590315 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 OR6B3Q8NGW1 331 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 CXorf38Q8TB03 319 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 PIK3R5Q8WYR1 880 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 TAF4BQ92750 862 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 GUCD1Q96NT3 240 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 NT5C1BQ96P26 610 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 INTS2Q9H0H0 1204 aaKnown RBP13.79□□□□□ -0.2
DDX39A-213ENST00000590315 SNX25Q9H3E2 840 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 NDST4Q9H3R1 872 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.79□□□□□ -0.2
DDX39A-213ENST00000590315 MTMR10Q9NXD2 777 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 L1RE1Q9UN81 338 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 PTPRDP23468 1912 aa13.79□□□□□ -0.2
DDX39A-213ENST00000590315 LAMA3Q16787 3333 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 FSCN2O14926 492 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 PER2O15055 1255 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 P4HA2O15460 535 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 LRRN2O75325 713 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 ASS1P00966 412 aaKnown RBP13.78□□□□□ -0.2
DDX39A-213ENST00000590315 ADH1AP07327 375 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 CD58P19256 250 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 TYMPP19971 482 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 NDUFV1P49821 464 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 PLCB2Q00722 1185 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 CAMK1Q14012 370 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 TCEAL5Q5H9L2 206 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 KIAA0319Q5VV43 1072 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 TMEM86AQ8N2M4 240 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 TOP6BLQ8N6T0 577 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 NIF3L1Q9GZT8 377 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 XYLT2Q9H1B5 865 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 CHST7Q9NS84 486 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 GDAP2Q9NXN4 497 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 MTCH2Q9Y6C9 303 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 CDY1Q9Y6F8 540 aa13.78□□□□□ -0.2
DDX39A-213ENST00000590315 CHD9Q3L8U1 2897 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms