RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 FAN1Q9Y2M0 1017 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 SNX9Q9Y5X1 595 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 SCN1AP35498 2009 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 ARHGEF37A1IGU5 675 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 FOXN3O00409 490 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-211ENST00000590239 NRP1O14786 923 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 HUS1O60921 280 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 KIF4AO95239 1232 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 GALTP07902 379 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 CCDC172P0C7W6 258 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 FERP16591 822 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 SLC11A1P49279 550 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 RABGGTAQ92696 567 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 SENP8Q96LD8 212 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 MMS19Q96T76 1030 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 GDF15Q99988 308 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 SMYD3Q9H7B4 428 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 CISHQ9NSE2 258 aa16.23■□□□□ 0.19
DDX39A-211ENST00000590239 ZNHIT6Q9NWK9 470 aaKnown RBP16.23■□□□□ 0.19
DDX39A-211ENST00000590239 PTPRSQ13332 1948 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 H0YGN5 161 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 CYB561D2O14569 222 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 TRAPPC3O43617 180 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 TACC1O75410 805 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 WEE2P0C1S8 567 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 LAG3P18627 525 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 FECHP22830 423 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 ALDH7A1P49419 539 aaKnown RBP16.22■□□□□ 0.19
DDX39A-211ENST00000590239 BCAR1P56945 870 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 CDK17Q00537 523 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 GOLGA8FQ08AF8 430 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 GOLGA8DPQ0D2H9 430 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 INCA1Q0VD86 236 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 ASIC2Q16515 512 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 SOWAHAQ2M3V2 549 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 TIGD5Q53EQ6 642 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 DSTYKQ6XUX3 929 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 SCARA5Q6ZMJ2 495 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 TMEM86AQ8N2M4 240 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 APPL2Q8NEU8 664 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 SPATA18Q8TC71 538 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 SP7Q8TDD2 431 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-211ENST00000590239 SUSD3Q96L08 255 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 RNPC3Q96LT9 517 aaKnown RBP16.22■□□□□ 0.19
DDX39A-211ENST00000590239 SDCBP2Q9H190 292 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 HCSTQ9UBK5 93 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 DSEQ9UL01 958 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 PRG3Q9Y2Y8 225 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-211ENST00000590239 PCDHB4Q9Y5E5 795 aa16.22■□□□□ 0.19
DDX39A-211ENST00000590239 MRPL42Q9Y6G3 142 aaKnown RBP16.22■□□□□ 0.19
DDX39A-211ENST00000590239 TRIOBPQ9H2D6 2365 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 M0QZQ0 153 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 TADA2AO75478 443 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 ODC1P11926 461 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 IGFBP6P24592 240 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-211ENST00000590239 BPIFB4P59827 614 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 ELAVL2Q12926 359 aaKnown RBP16.21■□□□□ 0.19
DDX39A-211ENST00000590239 SHHQ15465 462 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 MEA1Q16626 185 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 C9orf50Q5SZB4 431 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 IRF2BP2Q7Z5L9 587 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 ZNF558Q96NG5 402 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 UBE2OQ9C0C9 1292 aaKnown RBP16.21■□□□□ 0.19
DDX39A-211ENST00000590239 AAASQ9NRG9 546 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 ADAM28Q9UKQ2 775 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 BARX2Q9UMQ3 279 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-211ENST00000590239 L1RE1Q9UN81 338 aa16.21■□□□□ 0.19
DDX39A-211ENST00000590239 BZW2Q9Y6E2 419 aaKnown RBP16.21■□□□□ 0.19
DDX39A-211ENST00000590239 TLL1O43897 1013 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 GFPT2O94808 682 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 CYP11A1P05108 521 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 ITGB1P05556 798 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 KRT5P13647 590 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 CD58P19256 250 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 TYMPP19971 482 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 WARSP23381 471 aaKnown RBP16.2■□□□□ 0.18
DDX39A-211ENST00000590239 USP8P40818 1118 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 PRKCIP41743 596 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 RAP1GAPP47736 663 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 ZNF132P52740 706 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 CDH8P55286 799 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 SPOUT1Q5T280 376 aaKnown RBP16.2■□□□□ 0.18
DDX39A-211ENST00000590239 E4F1Q66K89 784 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-211ENST00000590239 KCNT2Q6UVM3 1135 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 UNC93AQ86WB7 457 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 LRRC8AQ8IWT6 810 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 ADGRF2Q8IZF7 708 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 PDCL2Q8N4E4 241 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 FIBCD1Q8N539 461 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 RBBP8NLQ8NC74 664 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-211ENST00000590239 CCDC112Q8NEF3 446 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 DNAI2Q9GZS0 605 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 MARCH5Q9NX47 278 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 PCDHB8Q9UN66 801 aa16.2■□□□□ 0.18
DDX39A-211ENST00000590239 SF3B1O75533 1304 aaKnown RBP eCLIP16.19■□□□□ 0.182e-6■■■■■ 37.2
DDX39A-211ENST00000590239 F8W810 466 aa16.19■□□□□ 0.18
DDX39A-211ENST00000590239 GABRDO14764 452 aa16.19■□□□□ 0.18
DDX39A-211ENST00000590239 CYP26A1O43174 497 aa16.19■□□□□ 0.18
DDX39A-211ENST00000590239 NRDCO43847 1150 aa16.19■□□□□ 0.18
DDX39A-211ENST00000590239 CILPO75339 1184 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms