RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 TATDN2Q93075 761 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 NT5C1BQ96P26 610 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 MMS19Q96T76 1030 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 TTPALQ9BTX7 342 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 OXCT2Q9BYC2 517 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-218ENST00000589294 NIF3L1Q9GZT8 377 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 ZNF576Q9H609 170 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 APOBEC3GQ9HC16 384 aaKnown RBP13.05□□□□□ -0.32
DNMT1-218ENST00000589294 IFNKQ9P0W0 207 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 MTUS1Q9ULD2 1270 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 DAAM1Q9Y4D1 1078 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 I3L4J1 428 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 LRRN2O75325 713 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 LHX1P48742 406 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 DSG1Q02413 1049 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 GCNT1Q02742 428 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 MRPL58Q14197 206 aaKnown RBP13.04□□□□□ -0.32
DNMT1-218ENST00000589294 SYCP1Q15431 976 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 KIAA0319Q5VV43 1072 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 KIAA1841Q6NSI8 718 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 PHLDB3Q6NSJ2 640 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 DPY19L2P1Q6NXN4 242 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 TAS1R1Q7RTX1 841 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 POF1BQ8WVV4 589 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 ARNTL2Q8WYA1 636 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 HERC2P3Q9BVR0 1158 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 VN1R3Q9BXE9 311 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 BCO2Q9BYV7 579 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 LMAN2LQ9H0V9 348 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 ALG13Q9NP73 1137 aaKnown RBP13.04□□□□□ -0.32
DNMT1-218ENST00000589294 NGRNQ9NPE2 291 aaKnown RBP13.04□□□□□ -0.32
DNMT1-218ENST00000589294 APEX2Q9UBZ4 518 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 SIK3Q9Y2K2 1263 aa13.04□□□□□ -0.32
DNMT1-218ENST00000589294 SCN1AP35498 2009 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 H7C4K7 107 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 GABRDO14764 452 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 CLSTN1O94985 981 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 CTSAP10619 480 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 RFX1P22670 979 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 GNL1P36915 607 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-218ENST00000589294 ASPAP45381 313 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 MFAP3P55082 362 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 YWHAHQ04917 246 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-218ENST00000589294 LRMPQ12912 555 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 CUL2Q13617 745 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 KLHDC7AQ5VTJ3 777 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 WSCD1Q658N2 575 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 OVOS1Q6IE37 1185 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 ANKS3Q6ZW76 656 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 TMC7Q7Z402 723 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 CEP57Q86XR8 500 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 THEM5Q8N1Q8 247 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 PDCL2Q8N4E4 241 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 PIK3R5Q8WYR1 880 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 XPO4Q9C0E2 1151 aaKnown RBP13.03□□□□□ -0.32
DNMT1-218ENST00000589294 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 CERS4Q9HA82 394 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 UBE2TQ9NPD8 197 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-218ENST00000589294 MRPL17Q9NRX2 175 aaKnown RBP13.03□□□□□ -0.32
DNMT1-218ENST00000589294 FBXL5Q9UKA1 691 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 L1RE1Q9UN81 338 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 IRAK3Q9Y616 596 aa13.03□□□□□ -0.32
DNMT1-218ENST00000589294 GBF1Q92538 1859 aa13.02□□□□□ -0.32
DNMT1-218ENST00000589294 TRANK1O15050 2925 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 GOLGA6L3A6NEY3 463 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 GRM6O15303 877 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 LILRB3O75022 631 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 CXCL14O95715 111 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 WARSP23381 471 aaKnown RBP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 DNAJB1P25685 340 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 TKTP29401 623 aaKnown RBP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 PBX1P40424 430 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 GLUD2P49448 558 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 ERVFC1P60507 584 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 YWHAEP62258 255 aaKnown RBP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 CREMQ03060 361 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 HABP4Q5JVS0 413 aaKnown RBP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 VARS2Q5ST30 1063 aaKnown RBP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 UNC93AQ86WB7 457 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 ADGRF2Q8IZF7 708 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 PPM1KQ8N3J5 372 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 MRPL43Q8N983 215 aaKnown RBP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 NEK11Q8NG66 645 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 LNX1Q8TBB1 728 aaPredicted RBP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 IQCDQ96DY2 449 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 PCMTD1Q96MG8 357 aaPredicted RBP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 ACBD6Q9BR61 282 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 NUP58Q9BVL2 599 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 LSM14BQ9BX40 385 aaKnown RBP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 EDEM3Q9BZQ6 932 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 TRIM5Q9C035 493 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 ZBP1Q9H171 429 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 SNX25Q9H3E2 840 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 RXFP1Q9HBX9 757 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 SIX2Q9NPC8 291 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms