RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 ADAM28Q9UKQ2 775 aa12.65□□□□□ -0.38
TOMM40-204ENST00000589253 CDH7Q9ULB5 785 aa12.65□□□□□ -0.38
TOMM40-204ENST00000589253 POLIQ9UNA4 740 aa12.65□□□□□ -0.38
TOMM40-204ENST00000589253 EXOC7Q9UPT5 735 aa12.65□□□□□ -0.38
TOMM40-204ENST00000589253 GIT1Q9Y2X7 761 aa12.65□□□□□ -0.38
TOMM40-204ENST00000589253 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 MIA3Q5JRA6 1907 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 CLIC2O15247 247 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 XYLBO75191 536 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 TADA2AO75478 443 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 PAPLNO95428 1278 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 MBD3O95983 291 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 HNRNPA1P09651 372 aaKnown RBP eCLIP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 CXCL8P10145 99 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 GLULP15104 373 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 GARTP22102 1010 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 MATR3P43243 847 aaKnown RBP eCLIP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 ENOX2Q16206 610 aaKnown RBP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 SLC10A6Q3KNW5 377 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 ZCWPW2Q504Y3 356 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 XKR4Q5GH76 650 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 PPM1LQ5SGD2 360 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 ALKAL1Q6UXT8 129 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 RSPO2Q6UXX9 243 aaPredicted RBP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 STXBP4Q6ZWJ1 553 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 GRASPQ7Z6J2 395 aaPredicted RBP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 ST13P5Q8NFI4 369 aaPredicted RBP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 POMGNT1Q8WZA1 660 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 CCDC47Q96A33 483 aaKnown RBP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 SAAL1Q96ER3 474 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 B3GALT6Q96L58 329 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 OSBPL6Q9BZF3 934 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 PCIF1Q9H4Z3 704 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 RMND1Q9NWS8 449 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 ZSCAN32Q9NX65 697 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 CPSF3Q9UKF6 684 aaKnown RBP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 AGO2Q9UKV8 859 aaKnown RBP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 USP18Q9UMW8 372 aa12.64□□□□□ -0.39
TOMM40-204ENST00000589253 EP300Q09472 2414 aaPredicted RBP12.64□□□□□ -0.39
TOMM40-204ENST00000589253 FANCMQ8IYD8 2048 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 GOLGA8IPA6NC78 632 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 GOLGA8JA6NMD2 632 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 FAM170BA6NMN3 283 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 PPP1R3GB7ZBB8 358 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 LRRN2O75325 713 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 RPL17P18621 184 aaKnown RBP12.63□□□□□ -0.39
TOMM40-204ENST00000589253 ACOT2P49753 483 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 PMS1P54277 932 aaKnown RBP12.63□□□□□ -0.39
TOMM40-204ENST00000589253 GRIK3Q13003 919 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 NAB2Q15742 525 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 SLC44A4Q53GD3 710 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 GLRA4Q5JXX5 417 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 SLFN12LQ6IEE8 588 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 PARM1Q6UWI2 310 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 C12orf56Q8IXR9 622 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 FGF14Q92915 247 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
TOMM40-204ENST00000589253 CCDC94Q9BW85 323 aaPredicted RBP12.63□□□□□ -0.39
TOMM40-204ENST00000589253 GPR62Q9BZJ7 368 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 HSPBP1Q9NZL4 362 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 CACNG4Q9UBN1 327 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 GMEB2Q9UKD1 530 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 RAB23Q9ULC3 237 aa12.63□□□□□ -0.39
TOMM40-204ENST00000589253 SMG5Q9UPR3 1016 aaKnown RBP12.63□□□□□ -0.39
TOMM40-204ENST00000589253 MRPS17Q9Y2R5 130 aaKnown RBP12.63□□□□□ -0.39
TOMM40-204ENST00000589253 MTCL1Q9Y4B5 1905 aaKnown RBP12.62□□□□□ -0.39
TOMM40-204ENST00000589253 TTC26A0AVF1 554 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 TRIM49BA6NDI0 452 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 F8W810 466 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 KRT37O76014 449 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 EFEMP2O95967 443 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 C8AP07357 584 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 ADRB2P07550 413 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 ATXN1P54253 815 aaKnown RBP12.62□□□□□ -0.39
TOMM40-204ENST00000589253 SOX4Q06945 474 aaPredicted RBP12.62□□□□□ -0.39
TOMM40-204ENST00000589253 HSP90AA2PQ14568 343 aaPredicted RBP12.62□□□□□ -0.39
TOMM40-204ENST00000589253 PPP2R5DQ14738 602 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 PDXDC1Q6P996 788 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 LILRA6Q6PI73 481 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 APBB1IPQ7Z5R6 666 aaPredicted RBP12.62□□□□□ -0.39
TOMM40-204ENST00000589253 CEP57Q86XR8 500 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 CBWD2Q8IUF1 395 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 MAML2Q8IZL2 1156 aaPredicted RBP12.62□□□□□ -0.39
TOMM40-204ENST00000589253 FGF13Q92913 245 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 FAM84AQ96KN4 292 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 ACAP3Q96P50 834 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 PPP1R10Q96QC0 940 aaKnown RBP12.62□□□□□ -0.39
TOMM40-204ENST00000589253 NELL2Q99435 816 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 RTKNQ9BST9 563 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 DDX23Q9BUQ8 820 aaKnown RBP12.62□□□□□ -0.39
TOMM40-204ENST00000589253 DMAC2Q9NW81 257 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 CNTN3Q9P232 1028 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 FBXW11Q9UKB1 542 aa12.62□□□□□ -0.39
TOMM40-204ENST00000589253 PATJQ8NI35 1801 aa12.61□□□□□ -0.39
TOMM40-204ENST00000589253 LACTBL1A8MY62 500 aa12.61□□□□□ -0.39
TOMM40-204ENST00000589253 PDXKO00764 312 aa12.61□□□□□ -0.39
TOMM40-204ENST00000589253 CCL16O15467 120 aa12.61□□□□□ -0.39
TOMM40-204ENST00000589253 EXTL3O43909 919 aa12.61□□□□□ -0.39
TOMM40-204ENST00000589253 TBC1D4O60343 1298 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms