RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 RNF180Q86T96 592 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 MCOLN2Q8IZK6 566 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 UBR7Q8N806 425 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 C12orf50Q8NA57 414 aaPredicted RBP10.61□□□□□ -0.71
VPS25-202ENST00000589219 RNF149Q8NC42 400 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 RBBP8NLQ8NC74 664 aaPredicted RBP10.61□□□□□ -0.71
VPS25-202ENST00000589219 TSEN2Q8NCE0 465 aaKnown RBP10.61□□□□□ -0.71
VPS25-202ENST00000589219 ALG3Q92685 438 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 EMID1Q96A84 441 aaPredicted RBP10.61□□□□□ -0.71
VPS25-202ENST00000589219 FAXDC2Q96IV6 333 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 GDAP1L1Q96MZ0 367 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 NIF3L1Q9GZT8 377 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 APOBEC3GQ9HC16 384 aaKnown RBP10.61□□□□□ -0.71
VPS25-202ENST00000589219 XPNPEP3Q9NQH7 507 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.61□□□□□ -0.71
VPS25-202ENST00000589219 GOLGA6AQ9NYA3 693 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 ERAP1Q9NZ08 941 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 CPSF3Q9UKF6 684 aaKnown RBP10.61□□□□□ -0.71
VPS25-202ENST00000589219 ATP11BQ9Y2G3 1177 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 PCDHB4Q9Y5E5 795 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 PCDHA3Q9Y5H8 950 aa10.61□□□□□ -0.71
VPS25-202ENST00000589219 RBM47A0AV96 593 aaKnown RBP10.6□□□□□ -0.71
VPS25-202ENST00000589219 A6NNZ2 444 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ACKR2O00590 384 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ABLIM1O14639 778 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 MAGEB2O15479 319 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ERLIN2O94905 339 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 C22orf31O95567 290 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 TNNC2P02585 160 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 HARSP12081 509 aaKnown RBP10.6□□□□□ -0.71
VPS25-202ENST00000589219 AKR1A1P14550 325 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ECHS1P30084 290 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 LMAN1P49257 510 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 PEX5P50542 639 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 NOMO3P69849 1222 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ARHGAP1Q07960 439 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 PTP4A2Q12974 167 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 DRP2Q13474 957 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 KYAT1Q16773 422 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 FAM187BQ17R55 369 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 TUBB8Q3ZCM7 444 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ZNF568Q3ZCX4 644 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ZBTB41Q5SVQ8 909 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ATF7IP2Q5U623 682 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 C1orf53Q5VUE5 145 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 NAA35Q5VZE5 725 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 LEKR1Q6ZMV7 388 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 TRIM50Q86XT4 487 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 PHF13Q86YI8 300 aaPredicted RBP10.6□□□□□ -0.71
VPS25-202ENST00000589219 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
VPS25-202ENST00000589219 LRRC71Q8N4P6 559 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 DEFB123Q8N688 67 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 OR5B17Q8NGF7 314 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 KRT35Q92764 455 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ANKRD36BP1Q96IX9 119 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ZIM3Q96PE6 472 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 TCHPQ9BT92 498 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 FZD8Q9H461 694 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 MRPL47Q9HD33 250 aaKnown RBP10.6□□□□□ -0.71
VPS25-202ENST00000589219 PRMT7Q9NVM4 692 aaPredicted RBP10.6□□□□□ -0.71
VPS25-202ENST00000589219 PARP2Q9UGN5 583 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 PCYOX1Q9UHG3 505 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 AMACRQ9UHK6 382 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 ANAPC7Q9UJX3 599 aa10.6□□□□□ -0.71
VPS25-202ENST00000589219 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.6□□□□□ -0.71
VPS25-202ENST00000589219 PODXLO00592 558 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 TTI1O43156 1089 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 PSTPIP1O43586 416 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 B4GALT4O60513 344 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 RPS6KA5O75582 802 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 CALB1P05937 261 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 TMEM191BP0C7N4 346 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 MARCKSL1P49006 195 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 GUCY2FP51841 1108 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 DRG2P55039 364 aaKnown RBP10.59□□□□□ -0.71
VPS25-202ENST00000589219 MBTD1Q05BQ5 628 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 ZNF211Q13398 564 aaPredicted RBP10.59□□□□□ -0.71
VPS25-202ENST00000589219 TRPC3Q13507 836 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 SNX17Q15036 470 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 DUOXA2Q1HG44 320 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 TMEM132AQ24JP5 1023 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 SGSM1Q2NKQ1 1148 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 SPOPLQ6IQ16 392 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 TMEM270Q6UE05 265 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 SLC13A5Q86YT5 568 aaPredicted RBP10.59□□□□□ -0.71
VPS25-202ENST00000589219 JAMLQ86YT9 394 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 RHPN2Q8IUC4 686 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 PPTC7Q8NI37 304 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.59□□□□□ -0.71
VPS25-202ENST00000589219 PTPRHQ9HD43 1115 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 ACP6Q9NPH0 428 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 PHF24Q9UPV7 400 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 TNFSF13BQ9Y275 285 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 NUB1Q9Y5A7 615 aa10.59□□□□□ -0.71
VPS25-202ENST00000589219 LTBP2Q14767 1821 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 COL6A3P12111 3177 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 GOLGA6L10A6NI86 522 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 HMGB1P1B2RPK0 211 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms