RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ITIH2P19823 946 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 IGFBP4P22692 258 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 MAGOHP61326 146 aaKnown RBP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 LMNB2Q03252 620 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 TMEM132BQ14DG7 1078 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 EMC2Q15006 297 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 ZACNQ401N2 412 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 MTERF2Q49AM1 385 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 FAM160B1Q5W0V3 765 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 TRMT10CQ7L0Y3 403 aaKnown RBP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 NLRP14Q86W24 1093 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 MCOLN2Q8IZK6 566 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 ANKRD35Q8N283 1001 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 C12orf50Q8NA57 414 aaPredicted RBP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 BBOF1Q8ND07 529 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 ZSWIM2Q8NEG5 633 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 OR2W6PQ8NHA6 318 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 FBXO25Q8TCJ0 367 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 SLCO2A1Q92959 643 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 ZKSCAN4Q969J2 545 aaPredicted RBP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 CENPTQ96BT3 561 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 PAGR1Q9BTK6 254 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 ROPN1BQ9BZX4 212 aaPredicted RBP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 ROPN1Q9HAT0 212 aaPredicted RBP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 PPANQ9NQ55 473 aaKnown RBP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 SCAF8Q9UPN6 1271 aaKnown RBP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 NR2E1Q9Y466 385 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 STYXL1Q9Y6J8 313 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 COL4A5P29400 1685 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 LRRIQ4A6NIV6 560 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 FSCN2O14926 492 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 MEFVO15553 781 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 ADH1BP00325 375 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 TGFB3P10600 412 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 ICAM3P32942 547 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 FLT3P36888 993 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 EFNA5P52803 228 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 SH3BP2P78314 561 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 NEDD9Q14511 834 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 COX20Q5RI15 118 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 SLC39A4Q6P5W5 647 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 TADA2BQ86TJ2 420 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 CCDC60Q8IWA6 550 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 REPS2Q8NFH8 660 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 ATP8B4Q8TF62 1192 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 BSNDQ8WZ55 320 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 DDX1Q92499 740 aaKnown RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 TMEM109Q9BVC6 243 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 TXLNGYQ9BZA5 131 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 PORCNQ9H237 461 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 ERVK-5Q9HDB9 667 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 A1CFQ9NQ94 594 aaKnown RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 RBAKQ9NYW8 714 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 WHRNQ9P202 907 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 LRFN2Q9ULH4 789 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 PTPN22Q9Y2R2 807 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 LTBP3Q9NS15 1303 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 NDC80O14777 642 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 THAP12O43422 761 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 GRIN3BO60391 1043 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 STBD1O95210 358 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 AGTP01019 485 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 PIGRP01833 764 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 HLA-DRAP01903 254 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 UNGP13051 313 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 PTGIRP43119 386 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 CENPCQ03188 943 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 PTP4A2Q12974 167 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 DRP2Q13474 957 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 DGKZQ13574 1117 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 SURF1Q15526 300 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 TTC31Q49AM3 519 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 CPLX4Q7Z7G2 160 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 RHOT1Q8IXI2 618 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 ATL2Q8NHH9 583 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 MYCBPAPQ8TBZ2 947 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 ZNF473Q8WTR7 871 aaKnown RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 ART4Q93070 314 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 KCTD15Q96SI1 283 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 MSTO1Q9BUK6 570 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 NIFKQ9BYG3 293 aaKnown RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 PDGFDQ9GZP0 370 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 DHX33Q9H6R0 707 aaKnown RBP7.87□□□□□ -1.15
ZNF540-206ENST00000589117 XPNPEP1Q9NQW7 623 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 ASIC3Q9UHC3 531 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 PCDHB4Q9Y5E5 795 aa7.87□□□□□ -1.15
ZNF540-206ENST00000589117 TLDC2A0PJX2 215 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 GOLGA8CPA6NN73 597 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 H0YHG0 523 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CLDN3O15551 220 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 PSTPIP1O43586 416 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 TRAPPC3O43617 180 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 GAS2O43903 313 aaKnown RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 RGS20O76081 388 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 C4BPAP04003 597 aaKnown RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 PAEPP09466 180 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 RARAP10276 462 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 COPB2P35606 906 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 RPL21P46778 160 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms