RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 H3BML4 177 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 SLC16A6O15403 523 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 PEX1O43933 1283 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 ERN1O75460 977 aaKnown RBP4.4□□□□□ -1.71
SMAD4-207ENST00000589076 MYL1P05976 194 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 PER3P56645 1201 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 KRTAP10-9P60411 292 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 SEPT2Q15019 361 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 MST1LQ2TV78 715 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 C3orf36Q3SXR2 165 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 MFSD14BQ5SR56 506 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 METRNLQ641Q3 311 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 Q6ZVL8 140 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 CHST15Q7LFX5 561 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-207ENST00000589076 RHOT1Q8IXI2 618 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 CAMKK1Q8N5S9 505 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 ZNF366Q8N895 744 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 OR2I1PQ8NGU4 316 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 ANKS1AQ92625 1134 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 HOXB13Q92826 284 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-207ENST00000589076 FUBP1Q96AE4 644 aaKnown RBP4.4□□□□□ -1.71
SMAD4-207ENST00000589076 PDLIM2Q96JY6 352 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 UHRF1Q96T88 793 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-207ENST00000589076 NEU1Q99519 415 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 ACO2Q99798 780 aaKnown RBP4.4□□□□□ -1.71
SMAD4-207ENST00000589076 KLK15Q9H2R5 256 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 ALG13Q9NP73 1137 aaKnown RBP4.4□□□□□ -1.71
SMAD4-207ENST00000589076 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-207ENST00000589076 KCNE5Q9UJ90 142 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 PCDHA13Q9Y5I0 950 aa4.4□□□□□ -1.71
SMAD4-207ENST00000589076 FRMPD2Q68DX3 1309 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-207ENST00000589076 LRRC3CA6NJW4 275 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 CXorf49A8MYA2 514 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-207ENST00000589076 PLIN1O60240 522 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 POMCP01189 267 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 GPD1P21695 349 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 CDC42EP1Q00587 391 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 DSC2Q02487 901 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 SCAPQ12770 1279 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 IL10RAQ13651 578 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 GRM3Q14832 879 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 MAP9Q49MG5 647 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 B3GNTL1Q67FW5 361 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-207ENST00000589076 SRGAP1Q7Z6B7 1085 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 DENND1CQ8IV53 801 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 OR7D4Q8NG98 312 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 SLC35B2Q8TB61 432 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 TTC17Q96AE7 1141 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 UROC1Q96N76 676 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 C1QTNF7Q9BXJ2 289 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 FAM204AQ9H8W3 233 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 ARNT2Q9HBZ2 717 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 TDP1Q9NUW8 608 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 SLC52A1Q9NWF4 448 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 KCTD5Q9NXV2 234 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 FOXJ2Q9P0K8 574 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 POLHQ9Y253 713 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 PCDHB1Q9Y5F3 818 aa4.39□□□□□ -1.71
SMAD4-207ENST00000589076 TUSC2O75896 110 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 UBXN7O94888 489 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 ARIH2O95376 493 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 MAP4K4O95819 1239 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-207ENST00000589076 ELANEP08246 267 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 TRIM27P14373 513 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 IL2RBP14784 551 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 SLC6A9P48067 706 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 FXR1P51114 621 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMAD4-207ENST00000589076 OCA2Q04671 838 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 SP140Q13342 867 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 RAB39AQ14964 217 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 EZH2Q15910 746 aaKnown RBP4.38□□□□□ -1.71
SMAD4-207ENST00000589076 KSR2Q6VAB6 950 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 ZNF572Q7Z3I7 529 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-207ENST00000589076 PQLC1Q8N2U9 271 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 ZBTB34Q8NCN2 500 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 C3orf20Q8ND61 904 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 NSUN6Q8TEA1 469 aaKnown RBP4.38□□□□□ -1.71
SMAD4-207ENST00000589076 KAT5Q92993 513 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 ZSWIM1Q9BR11 485 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 SARGQ9BW04 601 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 TMEM60Q9H2L4 133 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 ASB6Q9NWX5 421 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 CALCOCO1Q9P1Z2 691 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 DDX20Q9UHI6 824 aaKnown RBP4.38□□□□□ -1.71
SMAD4-207ENST00000589076 SIK3Q9Y2K2 1263 aa4.38□□□□□ -1.71
SMAD4-207ENST00000589076 POLR2AP24928 1970 aaKnown RBP4.37□□□□□ -1.71
SMAD4-207ENST00000589076 C1QL1O75973 258 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 HRGP04196 525 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 ALDH2P05091 517 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 RAP2AP10114 183 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 PHKG2P15735 406 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 ATP5JP18859 108 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 FGFR4P22455 802 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 SREBF1P36956 1147 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 HSD11B2P80365 405 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 SRSF7Q16629 238 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMAD4-207ENST00000589076 CYB5RLQ6IPT4 315 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 ZNF788Q6ZQV5 615 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 OVCH2Q7RTZ1 564 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 RSPH3Q86UC2 560 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms