RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 TMC7Q7Z402 723 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 APPL2Q8NEU8 664 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 TCF25Q9BQ70 676 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 LMAN2LQ9H0V9 348 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 APOBEC3GQ9HC16 384 aaKnown RBP16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 CHST7Q9NS84 486 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 DSEQ9UL01 958 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 TIMM13Q9Y5L4 95 aaPredicted RBP16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 NLRC5Q86WI3 1866 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 C2CD2LO14523 706 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 LPXNO60711 386 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 CTSAP10619 480 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 TYMPP19971 482 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 ERVFC1P60507 584 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 DSG1Q02413 1049 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 UBXN1Q04323 297 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 LRMPQ12912 555 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 CAMK1Q14012 370 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 PTPROQ16827 1216 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 FILIP1LQ4L180 1135 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 PLPP4Q5VZY2 271 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 WSCD1Q658N2 575 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 METTL23Q86XA0 190 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 TOP6BLQ8N6T0 577 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 LMO3Q8TAP4 145 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 MICAL1Q8TDZ2 1067 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 AUTS2Q8WXX7 1259 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 RIN2Q8WYP3 895 aaPredicted RBP16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 NIF3L1Q9GZT8 377 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 MRPL17Q9NRX2 175 aaKnown RBP16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 L1RE1Q9UN81 338 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 LAMA2P24043 3122 aaKnown RBP16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 CHD9Q3L8U1 2897 aa16.59■□□□□ 0.25
RPRD1A-208ENST00000589050 FSCN2O14926 492 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 CXCL14O95715 111 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 CYP11A1P05108 521 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 SLC9A1P19634 815 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 IRS1P35568 1242 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 YWHAHQ04917 246 aaPredicted RBP16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 SMC1AQ14683 1233 aaKnown RBP16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 PTPN14Q15678 1187 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 SOWAHAQ2M3V2 549 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 VARS2Q5ST30 1063 aaKnown RBP16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 KIAA0319Q5VV43 1072 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 OVOS1Q6IE37 1185 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 TRIM65Q6PJ69 517 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 PRSS55Q6UWB4 352 aaPredicted RBP16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 DPH6Q7L8W6 267 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 ADGRF2Q8IZF7 708 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 TATDN2Q93075 761 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 NAP1L5Q96NT1 182 aaPredicted RBP16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 NT5C1BQ96P26 610 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 SMYD3Q9H7B4 428 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 NGRNQ9NPE2 291 aaKnown RBP16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 RTN4Q9NQC3 1192 aaKnown RBP16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 SSX2IPQ9Y2D8 614 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 PCDHGC5Q9Y5F6 944 aa16.58■□□□□ 0.24
RPRD1A-208ENST00000589050 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 H7C4K7 107 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 PON1P27169 355 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 ASPAP45381 313 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 RAP1GAPP47736 663 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 FXR1P51114 621 aaKnown RBP eCLIP16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 KCNMA1Q12791 1236 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 PSMD5Q16401 504 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 PDE12Q6L8Q7 609 aaKnown RBP16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 PDXDC1Q6P996 788 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 ANKS3Q6ZW76 656 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 Q7L0L9 218 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 LIMS2Q7Z4I7 341 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 TMEM86AQ8N2M4 240 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 LNX1Q8TBB1 728 aaPredicted RBP16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 PIK3R5Q8WYR1 880 aa16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 MRPL38Q96DV4 380 aaKnown RBP16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 MRPL45Q9BRJ2 306 aaKnown RBP16.57■□□□□ 0.24
RPRD1A-208ENST00000589050 PLXNA4Q9HCM2 1894 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 COL4A4P53420 1690 aaPredicted RBP16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 TACC1O75410 805 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 CDH8P55286 799 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 UBASH3AP57075 661 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 APBA1Q02410 837 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 MRPL58Q14197 206 aaKnown RBP16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 CTXN3Q4LDR2 81 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 ZNF280DQ6N043 979 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 ARHGEF19Q8IW93 802 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 GPR65Q8IYL9 337 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 PPM1KQ8N3J5 372 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 MRPL43Q8N983 215 aaKnown RBP16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 KBTBD7Q8WVZ9 684 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 FAXDC2Q96IV6 333 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 LSM14BQ9BX40 385 aaKnown RBP16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 BCO2Q9BYV7 579 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 SDCBP2Q9H190 292 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 SNX25Q9H3E2 840 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 IFNKQ9P0W0 207 aa16.56■□□□□ 0.24
RPRD1A-208ENST00000589050 TRIOBPQ9H2D6 2365 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms