RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 RTL10Q7L3V2 364 aa20.26■□□□□ 0.83
ERCC1-207ENST00000588738 GJD3Q8N144 294 aa20.26■□□□□ 0.83
ERCC1-207ENST00000588738 CXorf38Q8TB03 319 aa20.26■□□□□ 0.83
ERCC1-207ENST00000588738 BORCS6Q96GS4 357 aa20.26■□□□□ 0.83
ERCC1-207ENST00000588738 FAM84AQ96KN4 292 aa20.26■□□□□ 0.83
ERCC1-207ENST00000588738 RHOBTB2Q9BYZ6 727 aa20.26■□□□□ 0.83
ERCC1-207ENST00000588738 SIX4Q9UIU6 781 aa20.26■□□□□ 0.83
ERCC1-207ENST00000588738 CDH22Q9UJ99 828 aa20.26■□□□□ 0.83
ERCC1-207ENST00000588738 WDR27A2RRH5 827 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 OR6C75A6NL08 312 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 ABLIM3O94929 683 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 HNRNPA1P09651 372 aaKnown RBP eCLIP20.25■□□□□ 0.83
ERCC1-207ENST00000588738 ELF1P32519 619 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 CASP4P49662 377 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 BFSP1Q12934 665 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 ADAM9Q13443 819 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 PPM1LQ5SGD2 360 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 CCDC149Q6ZUS6 474 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 TRAPPC11Q7Z392 1133 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 PARD3BQ8TEW8 1205 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 PRKD2Q9BZL6 878 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 POMKQ9H5K3 350 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 TSC2P49815 1807 aa20.25■□□□□ 0.83
ERCC1-207ENST00000588738 NCOR1O75376 2440 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 C19orf67A6NJJ6 358 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 MAPK13O15264 365 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 HUS1O60921 280 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 PAPLNO95428 1278 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 C8AP07357 584 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 CPB1P15086 417 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 ATF2P15336 505 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 AP3M2P53677 418 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 STIM1Q13586 685 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 EDRF1Q3B7T1 1238 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 ZCWPW2Q504Y3 356 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 ISM2Q6H9L7 571 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 THEM5Q8N1Q8 247 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 SLC7A14Q8TBB6 771 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 TMC2Q8TDI7 906 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 SMG7Q92540 1137 aaKnown RBP20.24■□□□□ 0.83
ERCC1-207ENST00000588738 HPDLQ96IR7 371 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 RPGRIP1Q96KN7 1286 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 GBP4Q96PP9 640 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 PIDD1Q9HB75 910 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 GDAP2Q9NXN4 497 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 MAN1B1Q9UKM7 699 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 MAFFQ9ULX9 164 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 BDP1A6H8Y1 2624 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 TTC28Q96AY4 2481 aa20.24■□□□□ 0.83
ERCC1-207ENST00000588738 PRRG1O14668 218 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 HOXA9P31269 272 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 PSMC2P35998 433 aaKnown RBP20.23■□□□□ 0.83
ERCC1-207ENST00000588738 PPP1R2P41236 205 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 CLDN10P78369 228 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 WSCD1Q658N2 575 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 SCARA3Q6AZY7 606 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 CENPPQ6IPU0 288 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 ADSSL1Q8N142 457 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 ZNF516Q92618 1163 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 ZNF707Q96C28 371 aaPredicted RBP20.23■□□□□ 0.83
ERCC1-207ENST00000588738 TSG101Q99816 390 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 GZF1Q9H116 711 aaPredicted RBP20.23■□□□□ 0.83
ERCC1-207ENST00000588738 CD320Q9NPF0 282 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 AFF4Q9UHB7 1163 aaKnown RBP20.23■□□□□ 0.83
ERCC1-207ENST00000588738 NR2E1Q9Y466 385 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 SNX9Q9Y5X1 595 aa20.23■□□□□ 0.83
ERCC1-207ENST00000588738 LRRIQ3A6PVS8 624 aaPredicted RBP20.22■□□□□ 0.83
ERCC1-207ENST00000588738 LOC730098B7Z3J9 87 aa20.22■□□□□ 0.83
ERCC1-207ENST00000588738 PSMA7O14818 248 aa20.22■□□□□ 0.83
ERCC1-207ENST00000588738 PHACTR2O75167 634 aa20.22■□□□□ 0.83
ERCC1-207ENST00000588738 XYLBO75191 536 aa20.22■□□□□ 0.83
ERCC1-207ENST00000588738 TRPC3Q13507 836 aa20.22■□□□□ 0.83
ERCC1-207ENST00000588738 TCEAL8Q8IYN2 117 aa20.22■□□□□ 0.83
ERCC1-207ENST00000588738 FEZF2Q8TBJ5 459 aa20.22■□□□□ 0.83
ERCC1-207ENST00000588738 PLEKHO2Q8TD55 490 aa20.22■□□□□ 0.83
ERCC1-207ENST00000588738 DENND4AQ7Z401 1863 aa20.22■□□□□ 0.83
ERCC1-207ENST00000588738 CUL9Q8IWT3 2517 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 MUC3AQ02505 3323 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 IKBKBO14920 756 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 CETN3O15182 167 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 AKAP3O75969 853 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 CST3P01034 146 aaPredicted RBP20.21■□□□□ 0.83
ERCC1-207ENST00000588738 KRT13P13646 458 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 ADCY1Q08828 1119 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 GPR17Q13304 367 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 CAMK4Q16566 473 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 RNF19BQ6ZMZ0 732 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 INTS8Q75QN2 995 aaKnown RBP20.21■□□□□ 0.83
ERCC1-207ENST00000588738 DPH6Q7L8W6 267 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 FAM186BQ8IYM0 893 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 TMEM86AQ8N2M4 240 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 PDCL2Q8N4E4 241 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 TOP6BLQ8N6T0 577 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 DHTKD1Q96HY7 919 aaPredicted RBP20.21■□□□□ 0.83
ERCC1-207ENST00000588738 CYP4F11Q9HBI6 524 aa20.21■□□□□ 0.83
ERCC1-207ENST00000588738 WDR6Q9NNW5 1121 aaKnown RBP20.21■□□□□ 0.83
ERCC1-207ENST00000588738 BIN1O00499 593 aa20.2■□□□□ 0.82
ERCC1-207ENST00000588738 CCL16O15467 120 aa20.2■□□□□ 0.82
ERCC1-207ENST00000588738 LRG1P02750 347 aa20.2■□□□□ 0.82
ERCC1-207ENST00000588738 OR4Q2P0C623 313 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms