RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 GAREM2Q75VX8 874 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 SCN1AP35498 2009 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 OR6C75A6NL08 312 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 LACTBL1A8MY62 500 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 PAPSS2O95340 614 aaPredicted RBP20.03■□□□□ 0.8
CCDC43-204ENST00000588687 NEFLP07196 543 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 TYMPP19971 482 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 CCNE1P24864 410 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 PPP2R3AQ06190 1150 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 ZRSR1Q15695 479 aaKnown RBP20.03■□□□□ 0.8
CCDC43-204ENST00000588687 RILPL1Q5EBL4 403 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 SLC39A4Q6P5W5 647 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 TXNDC11Q6PKC3 985 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 MSANTD3Q96H12 275 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 TMEM209Q96SK2 561 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 PLIN2Q99541 437 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 GPR88Q9GZN0 384 aa20.03■□□□□ 0.8
CCDC43-204ENST00000588687 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.03■□□□□ 0.8
CCDC43-204ENST00000588687 PRR5-ARHGAP8B1AHC4 643 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 K7ESF4 209 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 CHADO15335 359 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 MARCKSP29966 332 aaPredicted RBP20.02■□□□□ 0.8
CCDC43-204ENST00000588687 SOX9P48436 509 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 ZNF131P52739 623 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 NRLP54845 237 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 ARHGAP8P85298 464 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 DMWDQ09019 674 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 PLD1Q13393 1074 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 MYBPC2Q14324 1141 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 SPATA1Q5VX52 437 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 Q6ZS52 159 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 HAUS6Q7Z4H7 955 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 ATAD1Q8NBU5 361 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 OR10T2Q8NGX3 314 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 SECISBP2LQ93073 1101 aaKnown RBP20.02■□□□□ 0.8
CCDC43-204ENST00000588687 PSMG2Q969U7 264 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 E2F7Q96AV8 911 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 FIZ1Q96SL8 496 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 REEP2Q9BRK0 252 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 SLITRK6Q9H5Y7 841 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 RBM12Q9NTZ6 932 aaKnown RBP20.02■□□□□ 0.8
CCDC43-204ENST00000588687 C2orf42Q9NWW7 574 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 LARSQ9P2J5 1176 aaKnown RBP20.02■□□□□ 0.8
CCDC43-204ENST00000588687 KCNG1Q9UIX4 513 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 ODF2LQ9ULJ1 636 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 OBSL1O75147 1896 aa20.02■□□□□ 0.8
CCDC43-204ENST00000588687 DENND4CQ5VZ89 1909 aa20.02■□□□□ 0.79
CCDC43-204ENST00000588687 MYBPHLA2RUH7 354 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 VWA3AA6NCI4 1184 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 SLC38A8A6NNN8 435 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 HNRNPDLO14979 420 aaKnown RBP20.01■□□□□ 0.79
CCDC43-204ENST00000588687 OGTO15294 1046 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 SOAT2O75908 522 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 PRAMEF12O95522 483 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 SDHBP21912 280 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 LILRA4P59901 499 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 LPAL2Q16609 132 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 LAIR1Q6GTX8 287 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 OVOS1Q6IE37 1185 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 SPEM1Q8N4L4 309 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 GMEB2Q9UKD1 530 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 TBX20Q9UMR3 447 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 USP18Q9UMW8 372 aa20.01■□□□□ 0.79
CCDC43-204ENST00000588687 CFAP47Q6ZTR5 3102 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 A0A0B4J269 797 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 H0YCG3 227 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 CTHP32929 405 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 CXCL12P48061 93 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 EPHB3P54753 998 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 ARL6IP4Q66PJ3 421 aaKnown RBP20■□□□□ 0.79
CCDC43-204ENST00000588687 ARID3BQ8IVW6 561 aaPredicted RBP20■□□□□ 0.79
CCDC43-204ENST00000588687 CELF5Q8N6W0 485 aaKnown RBP20■□□□□ 0.79
CCDC43-204ENST00000588687 BICD1Q96G01 975 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 TSPAN18Q96SJ8 248 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 BLOC1S4Q9NUP1 217 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 HSFX1Q9UBD0 423 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 CPSF3Q9UKF6 684 aaKnown RBP20■□□□□ 0.79
CCDC43-204ENST00000588687 CDV3Q9UKY7 258 aaKnown RBP20■□□□□ 0.79
CCDC43-204ENST00000588687 SLC27A5Q9Y2P5 690 aa20■□□□□ 0.79
CCDC43-204ENST00000588687 MAP1BP46821 2468 aaKnown RBP20■□□□□ 0.79
CCDC43-204ENST00000588687 USP24Q9UPU5 2620 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 ANO9A1A5B4 782 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 SPECC1L-ADORA2AF8WAN1 911 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 CYP11A1P05108 521 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 NFICP08651 508 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 ATF6P18850 670 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 HOXC13P31276 330 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 LIG4P49917 911 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 CCINQ13939 588 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 PPP2R5DQ14738 602 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 KYAT1Q16773 422 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 C9orf57Q5W0N0 161 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 JADE1Q6IE81 842 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 C1orf228Q6PIY5 440 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 DSTYKQ6XUX3 929 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 DNAJB7Q7Z6W7 309 aaPredicted RBP19.99■□□□□ 0.79
CCDC43-204ENST00000588687 USP37Q86T82 979 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 ZFYVE19Q96K21 471 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 SENP8Q96LD8 212 aa19.99■□□□□ 0.79
CCDC43-204ENST00000588687 C8orf33Q9H7E9 229 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms