RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ACRBPQ8NEB7 543 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 KIAA1524Q8TCG1 905 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 SLC20A1Q8WUM9 679 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 FAXDC2Q96IV6 333 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 MRPL45Q9BRJ2 306 aaKnown RBP12.1□□□□□ -0.47
VMP1-207ENST00000588131 SYT11Q9BT88 431 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 CYP3A43Q9HB55 503 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 SPTLC3Q9NUV7 552 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 HMGXB4Q9UGU5 601 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 CNTN6Q9UQ52 1028 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.1□□□□□ -0.47
VMP1-207ENST00000588131 EPN1Q9Y6I3 576 aaPredicted RBP12.1□□□□□ -0.47
VMP1-207ENST00000588131 SSU72P8A0A1W2PR75 194 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 TBKBP1A7MCY6 615 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 KPNA7A9QM74 516 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 F8W810 466 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 ZNF263O14978 683 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 HOXA2O43364 376 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 NDUFA10O95299 355 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 P4HA1P13674 534 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 CYP11B1P15538 503 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 CHRNB2P17787 502 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 KIF11P52732 1056 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 EPHB4P54760 987 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 LILRA4P59901 499 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 WDR5P61964 334 aaKnown RBP12.09□□□□□ -0.47
VMP1-207ENST00000588131 FPGSQ05932 587 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
VMP1-207ENST00000588131 SOWAHAQ2M3V2 549 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 PAN2Q504Q3 1202 aaKnown RBP12.09□□□□□ -0.47
VMP1-207ENST00000588131 ZNF394Q53GI3 561 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 ZSCAN30Q86W11 494 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 CCDC170Q8IYT3 715 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 ABI1Q8IZP0 508 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 LNX1Q8TBB1 728 aaPredicted RBP12.09□□□□□ -0.47
VMP1-207ENST00000588131 EPS8L1Q8TE68 723 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 WHAMMQ8TF30 809 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 CCDC42Q96M95 316 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 TWNKQ96RR1 684 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 MMS19Q96T76 1030 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 HTATIP2Q9BUP3 242 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 ELOVL4Q9GZR5 314 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 NRDE2Q9H7Z3 1164 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 GDAP2Q9NXN4 497 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 KANSL3Q9P2N6 904 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 DNAJB4Q9UDY4 337 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 NOCTQ9UK39 431 aaKnown RBP12.09□□□□□ -0.47
VMP1-207ENST00000588131 ZMYND8Q9ULU4 1186 aaPredicted RBP12.09□□□□□ -0.47
VMP1-207ENST00000588131 REXO2Q9Y3B8 237 aaKnown RBP12.09□□□□□ -0.47
VMP1-207ENST00000588131 NME7Q9Y5B8 376 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 BZW2Q9Y6E2 419 aaKnown RBP12.09□□□□□ -0.47
VMP1-207ENST00000588131 TSC2P49815 1807 aa12.09□□□□□ -0.47
VMP1-207ENST00000588131 A0A087X0T9 212 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 CCDC85CA6NKD9 419 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 USP27XA6NNY8 438 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 EIF3CLB5ME19 914 aaKnown RBP12.08□□□□□ -0.48
VMP1-207ENST00000588131 DDX3XO00571 662 aaKnown RBP eCLIP12.08□□□□□ -0.483e-8■■■□□ 15.8
VMP1-207ENST00000588131 HCRTO43612 131 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 AKR1B10O60218 316 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 CILPO75339 1184 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 DGKIO75912 1065 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 KIF4AO95239 1232 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 AMHP03971 560 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 ITGB1P05556 798 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 CCDC172P0C7W6 258 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 FAM228BP0C875 321 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 CYLC1P35663 651 aaPredicted RBP12.08□□□□□ -0.48
VMP1-207ENST00000588131 KCNJ6P48051 423 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 AARSP49588 968 aaKnown RBP eCLIP12.08□□□□□ -0.48
VMP1-207ENST00000588131 YWHAEP62258 255 aaKnown RBP12.08□□□□□ -0.48
VMP1-207ENST00000588131 RNASELQ05823 741 aaKnown RBP12.08□□□□□ -0.48
VMP1-207ENST00000588131 INCA1Q0VD86 236 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 ORC1Q13415 861 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 PPIGQ13427 754 aaKnown RBP eCLIP12.08□□□□□ -0.48
VMP1-207ENST00000588131 TAF3Q5VWG9 929 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 OTOP2Q7RTS6 562 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 LIMS2Q7Z4I7 341 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 OSTM1Q86WC4 334 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 FMNL3Q8IVF7 1028 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 HASPINQ8TF76 798 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 KBTBD7Q8WVZ9 684 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 DDX1Q92499 740 aaKnown RBP12.08□□□□□ -0.48
VMP1-207ENST00000588131 TOP1MTQ969P6 601 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 DDX27Q96GQ7 796 aaKnown RBP12.08□□□□□ -0.48
VMP1-207ENST00000588131 SENP8Q96LD8 212 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 UROC1Q96N76 676 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 EIF3CQ99613 913 aaKnown RBP12.08□□□□□ -0.48
VMP1-207ENST00000588131 AGPAT1Q99943 283 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 DEF6Q9H4E7 631 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 L1RE1Q9UN81 338 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 ADGRG1Q9Y653 693 aa12.08□□□□□ -0.48
VMP1-207ENST00000588131 A0A0U1RQJ8 604 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 I3L4J1 428 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 CYB561D2O14569 222 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 EFCAB14O75071 495 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 BAIAP3O94812 1187 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 LCA5LO95447 670 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 MMEP08473 750 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms