RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 TREHO43280 583 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 ITGB3P05106 788 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 NFICP08651 508 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 CD19P15391 556 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 CD58P19256 250 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 CST5P28325 142 aaPredicted RBP9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 HOXC8P31273 242 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 CXCR5P32302 372 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 PNPLA4P41247 253 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 ASPAP45381 313 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 DNA2P51530 1060 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 PRMT2P55345 433 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 NOMO3P69849 1222 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 PTPN11Q06124 597 aaPredicted RBP9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 C2orf54Q08AI8 447 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 MESDQ14696 234 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 RUFY4Q6ZNE9 571 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 RPAINQ86UA6 219 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 SESTD1Q86VW0 696 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 RASGEF1CQ8N431 466 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 LRRC52Q8N7C0 313 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 C1orf127Q8N9H9 656 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 USP38Q8NB14 1042 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 NOA1Q8NC60 698 aaKnown RBP9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 CCDC26Q8TAB7 109 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 TRIB2Q92519 343 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 SNX27Q96L92 541 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 ZNF560Q96MR9 790 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 RUNDC3BQ96NL0 473 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 PSMB7Q99436 277 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 XYLT2Q9H1B5 865 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 ANKZF1Q9H8Y5 726 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 XPNPEP3Q9NQH7 507 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 CHST12Q9NRB3 414 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 PARVAQ9NVD7 372 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 WDR35Q9P2L0 1181 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 PIN4Q9Y237 131 aaKnown RBP9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 DOCK3Q8IZD9 2030 aa9.36□□□□□ -0.91
NEDD4L-221ENST00000588066 KRIT1O00522 736 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 CSDE1O75534 798 aaKnown RBP9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 GABBR2O75899 941 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 HMGCRP04035 888 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 WEE2P0C1S8 567 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 FAM163BP0C2L3 166 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 CHRM1P11229 460 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 VDRP11473 427 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 ZSCAN20P17040 1043 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 CYP3A5P20815 502 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 CDH5P33151 784 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 MAP2K2P36507 400 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 PRKCZQ05513 592 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 TMEM62Q0P6H9 643 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 FAM47CQ5HY64 1035 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 CC2D1AQ6P1N0 951 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 MON1BQ7L1V2 547 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 HDXQ7Z353 690 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 MAATS1Q7Z4T9 603 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 RNF180Q86T96 592 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 ERICH1Q86X53 443 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 ZNF784Q8NCA9 323 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 TRPV1Q8NER1 839 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 CPA5Q8WXQ8 436 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.35□□□□□ -0.913e-6■■■■■ 50.8
NEDD4L-221ENST00000588066 LENG1Q96BZ8 264 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 CYFIP2Q96F07 1278 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 ZSWIM1Q9BR11 485 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 LHX5Q9H2C1 402 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 SLITRK6Q9H5Y7 841 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 OGFRQ9NZT2 677 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 SRRDQ9UH36 339 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 IP6K2Q9UHH9 426 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 GTF2IRD1Q9UHL9 959 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 SIX4Q9UIU6 781 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 MTUS1Q9ULD2 1270 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 BARX2Q9UMQ3 279 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 GABRQQ9UN88 632 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 PACSIN2Q9UNF0 486 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 COG5Q9UP83 839 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 CASP8AP2Q9UKL3 1982 aa9.35□□□□□ -0.91
NEDD4L-221ENST00000588066 UMODL1Q5DID0 1318 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 GPR182O15218 404 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 DDX3YO15523 660 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 MAP3K13O43283 966 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 CILPO75339 1184 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 RPS6KA5O75582 802 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 KCNE1P15382 129 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 DESP17661 470 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 COMTP21964 271 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 FGFR4P22455 802 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 MMP8P22894 467 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 PAX3P23760 479 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 CTGFP29279 349 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 HOXA11P31270 313 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 MAN1A1P33908 653 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 RWDD2BP57060 319 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 CACNB2Q08289 660 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 CNGA2Q16280 664 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 LONRF2Q1L5Z9 754 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 NBPF20Q3BBV1 942 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms