RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MTMR11A4FU01 709 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 MICAL2O94851 1124 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 ODC1P11926 461 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 TXLNAP40222 546 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 VIPR2P41587 438 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 EPHA5P54756 1037 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 WNT7BP56706 349 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 CENPPQ6IPU0 288 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 EFCAB13Q8IY85 973 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 ADSSL1Q8N142 457 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 OR10T2Q8NGX3 314 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 SHKBP1Q8TBC3 707 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 SMARCD2Q92925 531 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 INTS4Q96HW7 963 aaKnown RBP15.53■□□□□ 0.08
VMP1-206ENST00000587945 FGFBP2Q9BYJ0 223 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 BACH2Q9BYV9 841 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 ASB7Q9H672 318 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 DPP3Q9NY33 737 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 DERAQ9Y315 318 aa15.53■□□□□ 0.08
VMP1-206ENST00000587945 PTPRZ1P23471 2315 aaPredicted RBP15.52■□□□□ 0.08
VMP1-206ENST00000587945 NCANO14594 1321 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 SHISA7A6NL88 538 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 CYB561D2O14569 222 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 GCNT3O95395 438 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 SP9P0CG40 484 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 IDEP14735 1019 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 TARSP26639 723 aaKnown RBP15.52■□□□□ 0.08
VMP1-206ENST00000587945 STAT6P42226 847 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 CASP5P51878 434 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 MYBPC2Q14324 1141 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 SLC39A14Q15043 492 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 L1TD1Q5T7N2 865 aaKnown RBP15.52■□□□□ 0.08
VMP1-206ENST00000587945 ARMCX5Q6P1M9 558 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 VITQ6UXI7 678 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 TMC8Q8IU68 726 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 GPIHBP1Q8IV16 184 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 MAML2Q8IZL2 1156 aaPredicted RBP15.52■□□□□ 0.08
VMP1-206ENST00000587945 ZSCAN18Q8TBC5 510 aaPredicted RBP15.52■□□□□ 0.08
VMP1-206ENST00000587945 KCNG4Q8TDN1 519 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 HVCN1Q96D96 273 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 SAAL1Q96ER3 474 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 PYM1Q9BRP8 204 aaKnown RBP15.52■□□□□ 0.08
VMP1-206ENST00000587945 FAM213AQ9BRX8 229 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 LRRC3Q9BY71 257 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 BCO2Q9BYV7 579 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 SLITRK6Q9H5Y7 841 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 BRD9Q9H8M2 597 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 SPATA6Q9NWH7 488 aaPredicted RBP15.52■□□□□ 0.08
VMP1-206ENST00000587945 SEL1LQ9UBV2 794 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 C2CD2Q9Y426 696 aa15.52■□□□□ 0.08
VMP1-206ENST00000587945 VPS13AQ96RL7 3174 aa15.52■□□□□ 0.07
VMP1-206ENST00000587945 A0A1W2PRU2 124 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 K7ELQ4 463 aaPredicted RBP15.51■□□□□ 0.07
VMP1-206ENST00000587945 STX6O43752 255 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 GAP43P17677 238 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 GDI1P31150 447 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 ALDH1A3P47895 512 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 EPHB3P54753 998 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 PLD1Q13393 1074 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 POSTNQ15063 836 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 STXBP5Q5T5C0 1151 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 WSCD1Q658N2 575 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 CCDC73Q6ZRK6 1079 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 PDILTQ8N807 584 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 LEMD2Q8NC56 503 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 RSPRY1Q96DX4 576 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 FAM84AQ96KN4 292 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 ACCSQ96QU6 501 aa15.51■□□□□ 0.07
VMP1-206ENST00000587945 TRMT61BQ9BVS5 477 aaKnown RBP15.51■□□□□ 0.07
VMP1-206ENST00000587945 ZNF334Q9HCZ1 680 aaPredicted RBP15.51■□□□□ 0.07
VMP1-206ENST00000587945 CFAP54Q96N23 3096 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 CITO14578 2027 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 HEPACAM2A8MVW5 462 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 CYP11A1P05108 521 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 PSMC3P17980 439 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 TAF6P49848 677 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 TFAMQ00059 246 aaKnown RBP15.5■□□□□ 0.07
VMP1-206ENST00000587945 SLC39A12Q504Y0 691 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 FOXD4L5Q5VV16 416 aaPredicted RBP15.5■□□□□ 0.07
VMP1-206ENST00000587945 SCARA3Q6AZY7 606 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 ZNF852Q6ZMS4 543 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 DNAJB7Q7Z6W7 309 aaPredicted RBP15.5■□□□□ 0.07
VMP1-206ENST00000587945 FOXD4L4Q8WXT5 416 aaPredicted RBP15.5■□□□□ 0.07
VMP1-206ENST00000587945 DNASE1L2Q92874 299 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 BORCS6Q96GS4 357 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 SEPT5Q99719 369 aaPredicted RBP15.5■□□□□ 0.07
VMP1-206ENST00000587945 LPIN3Q9BQK8 851 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 OSBPL6Q9BZF3 934 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 ZCWPW1Q9H0M4 648 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 ZSCAN16Q9H4T2 348 aaPredicted RBP15.5■□□□□ 0.07
VMP1-206ENST00000587945 PANK4Q9NVE7 773 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 TFIP11Q9UBB9 837 aaKnown RBP15.5■□□□□ 0.07
VMP1-206ENST00000587945 NDRG2Q9UN36 371 aaKnown RBP15.5■□□□□ 0.07
VMP1-206ENST00000587945 EXOC7Q9UPT5 735 aa15.5■□□□□ 0.07
VMP1-206ENST00000587945 RIF1Q5UIP0 2472 aaKnown RBP15.49■□□□□ 0.07
VMP1-206ENST00000587945 FRMD3A2A2Y4 597 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 GOLGA8IPA6NC78 632 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 GOLGA8JA6NMD2 632 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 LAMTOR5O43504 91 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 PRPF6O94906 941 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms