RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.25□□□□□ -0.77
LINC01539-201ENST00000587904 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.25□□□□□ -0.77
LINC01539-201ENST00000587904 CTNNAL1Q9UBT7 734 aa10.25□□□□□ -0.77
LINC01539-201ENST00000587904 L3MBTL1Q9Y468 752 aa10.25□□□□□ -0.77
LINC01539-201ENST00000587904 CEP350Q5VT06 3117 aa10.25□□□□□ -0.77
LINC01539-201ENST00000587904 ADGRA2Q96PE1 1338 aa10.25□□□□□ -0.77
LINC01539-201ENST00000587904 TRPM7Q96QT4 1865 aa10.25□□□□□ -0.77
LINC01539-201ENST00000587904 GOLGA6L10A0A0M3HER8 536 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CES2O00748 559 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 TOM1L1O75674 476 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 TMEM253P0C7T8 217 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 TNFAIP3P21580 790 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 MARK3P27448 753 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 POU5F1BQ06416 359 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 MAPK6Q16659 721 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 EMBQ6PCB8 327 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 SV2AQ7L0J3 742 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CD302Q8IX05 232 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 FAM71AQ8IYT1 594 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CACNA2D3Q8IZS8 1091 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 SYCE1Q8N0S2 351 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CCDC63Q8NA47 563 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 LNX1Q8TBB1 728 aaPredicted RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CAGE1Q8TC20 777 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CCT6BQ92526 530 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 PPP2R3CQ969Q6 453 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 NAF1Q96HR8 494 aaKnown RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 DHRS1Q96LJ7 313 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 RNPC3Q96LT9 517 aaKnown RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CGRRF1Q99675 332 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 KATNBL1Q9H079 304 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 VCX3BQ9H321 246 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 RRAGCQ9HB90 399 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 VCX3AQ9NNX9 186 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 C1orf112Q9NSG2 853 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 RBAKQ9NYW8 714 aaPredicted RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 SALL4Q9UJQ4 1053 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 FOXN3O00409 490 aaPredicted RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 MAGEB2O15479 319 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CLDN3O15551 220 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 MSCO60682 206 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 LRRN2O75325 713 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 LGALS2P05162 132 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 DLATP10515 647 aaKnown RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 NLRP11P59045 1033 aaKnown RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 BTG3Q14201 252 aaPredicted RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 SURF1Q15526 300 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 ZACNQ401N2 412 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 SH2D4BQ5SQS7 431 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 DPP9Q86TI2 863 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 GLYCTKQ8IVS8 523 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 PPM1KQ8N3J5 372 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 ATP11CQ8NB49 1132 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 TAS1R2Q8TE23 839 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 AGAP11Q8TF27 550 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 U2AF1L4Q8WU68 220 aaKnown RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 RFFLQ8WZ73 363 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 DHX38Q92620 1227 aaKnown RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 COPS5Q92905 334 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CAVIN3Q969G5 261 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 MAML3Q96JK9 1138 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 AGPAT1Q99943 283 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 CORO1BQ9BR76 489 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 TARS2Q9BW92 718 aaKnown RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 PACSIN1Q9BY11 444 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 NACA2Q9H009 215 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 ABHD16BQ9H3Z7 469 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 PDGFCQ9NRA1 345 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 ANKFY1Q9P2R3 1169 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 SUCLA2Q9P2R7 463 aaPredicted RBP10.24□□□□□ -0.77
LINC01539-201ENST00000587904 SLC4A7Q9Y6M7 1214 aa10.24□□□□□ -0.77
LINC01539-201ENST00000587904 GMNCA6NCL1 334 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 MANSC4A6NHS7 340 aaPredicted RBP10.23□□□□□ -0.77
LINC01539-201ENST00000587904 BUB1O43683 1085 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 PALMO75781 387 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 C22orf31O95567 290 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 PRKCBP05771 671 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 GSTA2P09210 222 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 HOXD8P13378 290 aaPredicted RBP10.23□□□□□ -0.77
LINC01539-201ENST00000587904 MATR3P43243 847 aaKnown RBP eCLIP10.23□□□□□ -0.77
LINC01539-201ENST00000587904 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
LINC01539-201ENST00000587904 PPP1R7Q15435 360 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 CLPPQ16740 277 aaPredicted RBP10.23□□□□□ -0.77
LINC01539-201ENST00000587904 MEI1Q5TIA1 1274 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 BRSK2Q8IWQ3 736 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 RNF149Q8NC42 400 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 HELQQ8TDG4 1101 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 CTNNBL1Q8WYA6 563 aaPredicted RBP10.23□□□□□ -0.77
LINC01539-201ENST00000587904 SEMA4DQ92854 862 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 ARL8AQ96BM9 186 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 TLR10Q9BXR5 811 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 VCXQ9H320 206 aa10.23□□□□□ -0.77
LINC01539-201ENST00000587904 TOPORSQ9NS56 1045 aaPredicted RBP10.23□□□□□ -0.77
LINC01539-201ENST00000587904 GRID2IPA4D2P6 1211 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ANKRD62A6NC57 917 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 HMGB1P1B2RPK0 211 aaPredicted RBP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 E7ENQ6 273 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 E7EVH7 732 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TNNI1P19237 187 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms