RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 UBXN11Q5T124 520 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 TMEM164Q5U3C3 297 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 CEP135Q66GS9 1140 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 TTI2Q6NXR4 508 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 ANKRD54Q6NXT1 300 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 CMTR2Q8IYT2 770 aaKnown RBP9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 CSGALNACT2Q8N6G5 542 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 AOPEPQ8N6M6 819 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 CEP120Q8N960 986 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 DTWD2Q8NBA8 298 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 RNF169Q8NCN4 708 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 ZSWIM2Q8NEG5 633 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 STK32AQ8WU08 396 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 CCDC51Q96ER9 411 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 EEF2KMTQ96G04 330 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 DUSP9Q99956 384 aaKnown RBP9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 HINFPQ9BQA5 517 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 FTHL17Q9BXU8 183 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 POMKQ9H5K3 350 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 CHST12Q9NRB3 414 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 HSPBP1Q9NZL4 362 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 CGNQ9P2M7 1197 aaKnown RBP9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 AGO2Q9UKV8 859 aaKnown RBP9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 MYO10Q9HD67 2058 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 ATRXP46100 2492 aa9.15□□□□□ -0.94
NEDD4L-218ENST00000587547 GPR179Q6PRD1 2367 aa9.15□□□□□ -0.95
NEDD4L-218ENST00000587547 USP24Q9UPU5 2620 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 A0A0B4J269 797 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 ABLIM1O14639 778 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 CETN3O15182 167 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 OGTO15294 1046 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 EXOC3O60645 756 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 PROZP22891 400 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 RPL13P26373 211 aaKnown RBP9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 TNFSF9P41273 254 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 ACOT2P49753 483 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 ERVFC1P60507 584 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 SNRPFP62306 86 aaKnown RBP9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 MCL1Q07820 350 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 ADAM9Q13443 819 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 EML3Q32P44 896 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 EDRF1Q3B7T1 1238 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 ZCWPW2Q504Y3 356 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 HSP90AA4PQ58FG1 418 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 CT47A1Q5JQC4 288 aaPredicted RBP9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 ZBTB41Q5SVQ8 909 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 LLGL2Q6P1M3 1020 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 TMEM184AQ6ZMB5 413 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 RTN4RL1Q86UN2 441 aaPredicted RBP9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 CREBRFQ8IUR6 639 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 CRIPAKQ8N1N5 446 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 GPD1LQ8N335 351 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 XXYLT1Q8NBI6 393 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 RNF214Q8ND24 703 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 MICAL1Q8TDZ2 1067 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 LPPQ93052 612 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 MED15Q96RN5 788 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 FAM213AQ9BRX8 229 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 SRRTQ9BXP5 876 aaKnown RBP9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 NXF3Q9H4D5 531 aaKnown RBP9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 CBX8Q9HC52 389 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 PTPRHQ9HD43 1115 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 FAM105AQ9NUU6 356 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 SNTG2Q9NY99 539 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 TRAF3IP3Q9Y228 551 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 NR2E1Q9Y466 385 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 HES2Q9Y543 173 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 IPPQ9Y573 584 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 PCDHB2Q9Y5E7 798 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 STYXL1Q9Y6J8 313 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 PLXNA4Q9HCM2 1894 aa9.14□□□□□ -0.95
NEDD4L-218ENST00000587547 BECN2A8MW95 431 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 EXTL3O43909 919 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 ADRB2P07550 413 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 STAG3L1P0CL83 205 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 ITGA4P13612 1032 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 AKAP5P24588 427 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 CASP4P49662 377 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 RAB27AP51159 221 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 SH3BP2P78314 561 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 FKBP3Q00688 224 aaKnown RBP9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 MYL5Q02045 173 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 CCDC40Q4G0X9 1142 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 SPATA1Q5VX52 437 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 LRRC55Q6ZSA7 311 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 LUZP1Q86V48 1076 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 CBWD2Q8IUF1 395 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 C12orf56Q8IXR9 622 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 SMG8Q8ND04 991 aaKnown RBP9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 CDCA3Q99618 268 aaPredicted RBP9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 CCDC94Q9BW85 323 aaPredicted RBP9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 SEMA4AQ9H3S1 761 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 RGS18Q9NS28 235 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 C1orf112Q9NSG2 853 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 KLK14Q9P0G3 267 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 PARP2Q9UGN5 583 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 LRFN2Q9ULH4 789 aa9.13□□□□□ -0.95
NEDD4L-218ENST00000587547 FRMD4BQ9Y2L6 1034 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms