RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 FAM170AA1A519 330 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 EFCAB8A8MWE9 144 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 NCK2O43639 380 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 ITGB3P05106 788 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 PRLRP16471 622 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 IFI16Q16666 785 aaKnown RBP21.84■■□□□ 1.09
ATG4D-204ENST00000586417 NT5DC4Q86YG4 428 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 CD302Q8IX05 232 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 CEP112Q8N8E3 955 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 LINC01599Q8WXQ3 324 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 SNX27Q96L92 541 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 ADAM2Q99965 735 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 CXCL16Q9H2A7 254 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 NXF3Q9H4D5 531 aaKnown RBP21.84■■□□□ 1.09
ATG4D-204ENST00000586417 PLEKHA5Q9HAU0 1116 aa21.84■■□□□ 1.09
ATG4D-204ENST00000586417 TRIP11Q15643 1979 aa21.83■■□□□ 1.09
ATG4D-204ENST00000586417 CLSTN1O94985 981 aa21.83■■□□□ 1.09
ATG4D-204ENST00000586417 CXCL10P02778 98 aa21.83■■□□□ 1.09
ATG4D-204ENST00000586417 CSF2RAP15509 400 aa21.83■■□□□ 1.09
ATG4D-204ENST00000586417 NOP2P46087 812 aaKnown RBP21.83■■□□□ 1.09
ATG4D-204ENST00000586417 SMYD5Q6GMV2 418 aa21.83■■□□□ 1.09
ATG4D-204ENST00000586417 SLC35G2Q8TBE7 412 aa21.83■■□□□ 1.09
ATG4D-204ENST00000586417 FTCDO95954 541 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 KRT19P08727 400 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 ZSCAN20P17040 1043 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-204ENST00000586417 TCEAL1Q15170 157 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 CLEC16AQ2KHT3 1053 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 MEI1Q5TIA1 1274 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 RSRC2Q7L4I2 434 aaKnown RBP21.82■■□□□ 1.08
ATG4D-204ENST00000586417 SLFN11Q7Z7L1 901 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 SMG8Q8ND04 991 aaKnown RBP21.82■■□□□ 1.08
ATG4D-204ENST00000586417 TRIM6Q9C030 488 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-204ENST00000586417 RNF39Q9H2S5 420 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 VRTNQ9H8Y1 702 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 OSGEPQ9NPF4 335 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 CISHQ9NSE2 258 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 UNGP13051 313 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-204ENST00000586417 GUCY2FP51841 1108 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 ERCC6LQ2NKX8 1250 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 MFSD5Q6N075 450 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 ALKAL1Q6UXT8 129 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 FAXDC2Q96IV6 333 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 BCO2Q9BYV7 579 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 PUF60Q9UHX1 559 aaKnown RBP21.82■■□□□ 1.08
ATG4D-204ENST00000586417 ITGA11Q9UKX5 1188 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 POLIQ9UNA4 740 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 DERAQ9Y315 318 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 HYOU1Q9Y4L1 999 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 IPPQ9Y573 584 aa21.82■■□□□ 1.08
ATG4D-204ENST00000586417 ZNF185O15231 689 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 SYN1P17600 705 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 IBSPP21815 317 aaPredicted RBP21.81■■□□□ 1.08
ATG4D-204ENST00000586417 GNA15P30679 374 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 ATICP31939 592 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 ELF2Q15723 593 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 ACAD10Q6JQN1 1059 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 SCARA5Q6ZMJ2 495 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 ANKRD7Q92527 254 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 SEPT8Q92599 483 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 KIF12Q96FN5 646 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 ZMAT2Q96NC0 199 aaKnown RBP21.81■■□□□ 1.08
ATG4D-204ENST00000586417 OSBPL9Q96SU4 736 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 HTATIP2Q9BUP3 242 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 APOL6Q9BWW8 343 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 GOLPH3Q9H4A6 298 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 FAM105AQ9NUU6 356 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 COG5Q9UP83 839 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 CEP290O15078 2479 aa21.81■■□□□ 1.08
ATG4D-204ENST00000586417 MEIS3P2A8K0S8 358 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 RECQL4O94761 1208 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 PARNO95453 639 aaKnown RBP21.8■■□□□ 1.08
ATG4D-204ENST00000586417 CYP1A1P04798 512 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-204ENST00000586417 WEE2P0C1S8 567 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 CD58P19256 250 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 AKAP5P24588 427 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 POLR2BP30876 1174 aaKnown RBP21.8■■□□□ 1.08
ATG4D-204ENST00000586417 HADHBP55084 474 aaKnown RBP21.8■■□□□ 1.08
ATG4D-204ENST00000586417 GPC5P78333 572 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 ZBTB6Q15916 424 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 ZNF667Q5HYK9 610 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 DPP3Q9NY33 737 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 CNTN3Q9P232 1028 aa21.8■■□□□ 1.08
ATG4D-204ENST00000586417 NXF1Q9UBU9 619 aaKnown RBP21.8■■□□□ 1.08
ATG4D-204ENST00000586417 STAU1O95793 577 aaKnown RBP21.79■■□□□ 1.08
ATG4D-204ENST00000586417 CFHP08603 1231 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 TCP1P17987 556 aaKnown RBP21.79■■□□□ 1.08
ATG4D-204ENST00000586417 CREG2Q8IUH2 290 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 RHOT2Q8IXI1 618 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 COG1Q8WTW3 980 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 DPF3Q92784 378 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 BADQ92934 168 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 SDCBP2Q9H190 292 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 RGS18Q9NS28 235 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 PRKAG2Q9UGJ0 569 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 PDCD11Q14690 1871 aaKnown RBP21.79■■□□□ 1.08
ATG4D-204ENST00000586417 TNRC18O15417 2968 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-204ENST00000586417 ACRP10323 421 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 YARSP54577 528 aaKnown RBP21.79■■□□□ 1.08
ATG4D-204ENST00000586417 WDR72Q3MJ13 1102 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 UBXN4Q92575 508 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms