RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZPBP2Q6X784 338 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 ARID3BQ8IVW6 561 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-225ENST00000586385 TTC8Q8TAM2 541 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 NETO1Q8TDF5 533 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 LRRC15Q8TF66 581 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 GTSE1Q9NYZ3 720 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 LIMCH1Q9UPQ0 1083 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 MAP1BP46821 2468 aaKnown RBP12.94□□□□□ -0.34
BRCA1-225ENST00000586385 NPHP3-ACAD11A0A0J9YXS1 232 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 SPECC1L-ADORA2AF8WAN1 911 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 LRP3O75074 770 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 ADRB2P07550 413 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 CDR1P51861 262 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-225ENST00000586385 TNK2Q07912 1038 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 CCINQ13939 588 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 ENOX2Q16206 610 aaKnown RBP12.94□□□□□ -0.34
BRCA1-225ENST00000586385 CSRP2Q16527 193 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 ARSHQ5FYA8 562 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 HEATR6Q6AI08 1181 aaKnown RBP12.94□□□□□ -0.34
BRCA1-225ENST00000586385 PRR23CQ6ZRP0 262 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 DNAJB7Q7Z6W7 309 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-225ENST00000586385 OR10T2Q8NGX3 314 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 KCNN1Q92952 543 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 CHFRQ96EP1 664 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 KIF12Q96FN5 646 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 GPR88Q9GZN0 384 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 PLEKHA5Q9HAU0 1116 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 IL21Q9HBE4 155 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.94□□□□□ -0.34
BRCA1-225ENST00000586385 RAB23Q9ULC3 237 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 CHD8Q9HCK8 2581 aa12.94□□□□□ -0.34
BRCA1-225ENST00000586385 OR6C75A6NL08 312 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 CLDN3O15551 220 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 CLTAP09496 248 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 CYP3A5P20815 502 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-225ENST00000586385 HOXA6P31267 233 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 PRPHP41219 470 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 SLC12A3P55017 1021 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 PPP2R5DQ14738 602 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 PON2Q15165 354 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 KRT79Q5XKE5 535 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 SLC39A4Q6P5W5 647 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 LONP2Q86WA8 852 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 FAM160A2Q8N612 972 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-225ENST00000586385 SYT2Q8N9I0 419 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-225ENST00000586385 PSMG2Q969U7 264 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 E2F7Q96AV8 911 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 MSANTD3Q96H12 275 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 PLIN2Q99541 437 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 KIF2CQ99661 725 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 LPIN3Q9BQK8 851 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 TIPINQ9BVW5 301 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 C8orf33Q9H7E9 229 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-225ENST00000586385 RXFP3Q9NSD7 469 aa12.93□□□□□ -0.34
BRCA1-225ENST00000586385 NOL7Q9UMY1 257 aaKnown RBP12.93□□□□□ -0.34
BRCA1-225ENST00000586385 PDCD11Q14690 1871 aaKnown RBP12.93□□□□□ -0.34
BRCA1-225ENST00000586385 CITO14578 2027 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 EXTL3O43909 919 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 ATF6P18850 670 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 TYMPP19971 482 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 KPNA1P52294 538 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-225ENST00000586385 EPHB3P54753 998 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 NCKAP1LP55160 1127 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 LILRA4P59901 499 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 CYP4F8P98187 520 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 STRN3Q13033 797 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 MYBPC2Q14324 1141 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 LRRC32Q14392 662 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 SPATA1Q5VX52 437 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 OVOS1Q6IE37 1185 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 RALGPS2Q86X27 583 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-225ENST00000586385 YAF2Q8IY57 180 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 RIN3Q8TB24 985 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 CSGALNACT1Q8TDX6 532 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 RAB34Q9BZG1 259 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 SMG9Q9H0W8 520 aaKnown RBP12.92□□□□□ -0.34
BRCA1-225ENST00000586385 UBQLN1Q9UMX0 589 aaKnown RBP12.92□□□□□ -0.34
BRCA1-225ENST00000586385 STK24Q9Y6E0 443 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 USP24Q9UPU5 2620 aa12.92□□□□□ -0.34
BRCA1-225ENST00000586385 ZFHX4Q86UP3 3567 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 OTOL1A6NHN0 477 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-225ENST00000586385 LAD1O00515 517 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 TM4SF5O14894 197 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 PIGRP01833 764 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 NFICP08651 508 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 PLA2G4BP0C869 781 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 GABRR2P28476 465 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 WEE1P30291 646 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 CNR2P34972 360 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
BRCA1-225ENST00000586385 ATP2C1P98194 919 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-225ENST00000586385 PLD1Q13393 1074 aa12.91□□□□□ -0.34
BRCA1-225ENST00000586385 ZRSR1Q15695 479 aaKnown RBP12.91□□□□□ -0.34
BRCA1-225ENST00000586385 TMEM119Q4V9L6 283 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms