RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 CCNI2Q6ZMN8 369 aaPredicted RBP13.87□□□□□ -0.19
RAB11FIP4-210ENST00000585058 NUDT18Q6ZVK8 323 aa13.87□□□□□ -0.19
RAB11FIP4-210ENST00000585058 JAMLQ86YT9 394 aa13.87□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ADSSL1Q8N142 457 aa13.87□□□□□ -0.19
RAB11FIP4-210ENST00000585058 IPMKQ8NFU5 416 aa13.87□□□□□ -0.19
RAB11FIP4-210ENST00000585058 LSM7Q9UK45 103 aaKnown RBP13.87□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CPSF1Q10570 1443 aaKnown RBP13.87□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CDHR2Q9BYE9 1310 aa13.87□□□□□ -0.19
RAB11FIP4-210ENST00000585058 PRR36Q9H6K5 1346 aa13.87□□□□□ -0.19
RAB11FIP4-210ENST00000585058 KIAA0391O15091 583 aaKnown RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SPRP35270 261 aaPredicted RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 TWF1Q12792 350 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SMTNL2Q2TAL5 461 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 USP6NLQ92738 828 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SRPK1Q96SB4 655 aaKnown RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 TMEM245Q9H330 911 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 FAM49BQ9NUQ9 324 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 LOC100653049A0A140TA62 436 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 DGAT1O75907 488 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 KRT34O76011 436 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 KRT16P08779 473 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 MAGEA4P43358 317 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CLK1P49759 484 aaKnown RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 STILQ15468 1287 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 PTRHD1Q6GMV3 140 aaKnown RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SPATA18Q8TC71 538 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 VIPAS39Q9H9C1 493 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 NPHP4O75161 1426 aaPredicted RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 M0R3G1 203 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CAPZA2P47755 286 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CPA2P48052 419 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 FXR1P51114 621 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 DPYDQ12882 1025 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SCARF1Q14162 830 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SGSM1Q2NKQ1 1148 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 RASGRP2Q7LDG7 609 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 DNAJC9Q8WXX5 260 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 WNK4Q96J92 1243 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ZFP42Q96MM3 310 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 PRPF18Q99633 342 aaKnown RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 HNRNPRO43390 633 aaKnown RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 KYNUQ16719 465 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CENPPQ6IPU0 288 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CCT7Q99832 543 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 KCNF1Q9H3M0 494 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 MTO1Q9Y2Z2 717 aaKnown RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 GUCA1CO95843 209 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ARL4DP49703 201 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ARHGEF7Q14155 803 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 TTC39BQ5VTQ0 682 aaPredicted RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SLC7A14Q8TBB6 771 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 FAM84BQ96KN1 310 aaPredicted RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 TIPINQ9BVW5 301 aa13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CELF4Q9BZC1 486 aaKnown RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 C6orf203Q9P0P8 240 aaPredicted RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.86□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SSU72P8A0A1W2PR75 194 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 POLBP06746 335 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 TCF3P15923 654 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 COMTP21964 271 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 HOXD10P28358 340 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ITGA8P53708 1063 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 KCNK10P57789 538 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CCZ1BP86790 482 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CCZ1P86791 482 aaPredicted RBP13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 TMEM62Q0P6H9 643 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 XKR3Q5GH77 459 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SCFD2Q8WU76 684 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 KRT35Q92764 455 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 PDLIM2Q96JY6 352 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SEPT5Q99719 369 aaPredicted RBP13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 OSBPL8Q9BZF1 889 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 BRD8Q9H0E9 1235 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SNRPAP09012 282 aaKnown RBP13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 FDX1P10109 184 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ETFBP38117 255 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ANGPT1Q15389 498 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 NAB2Q15742 525 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 STOX1Q6ZVD7 989 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ZNF513Q8N8E2 541 aaPredicted RBP13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 VPS50Q96JG6 964 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CCSER1Q9C0I3 900 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 PAK5Q9P286 719 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 LZTS3O60299 673 aaPredicted RBP13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CLASP2O75122 1294 aaKnown RBP13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SLC9A1P19634 815 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CHI3L2Q15782 390 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 AGBL2Q5U5Z8 902 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 AGBL1Q96MI9 1066 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SCN3BQ9NY72 215 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 HERC5Q9UII4 1024 aaKnown RBP13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ARHGAP31Q2M1Z3 1444 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SERPINB3P29508 390 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 LSP1P33241 339 aa13.85□□□□□ -0.19
RAB11FIP4-210ENST00000585058 PWP1Q13610 501 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms