RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 GLP2RO95838 553 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 TNNI1P19237 187 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 FGFR3P22607 806 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 PAX3P23760 479 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 FAM171A1Q5VUB5 890 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 TCERG1LQ5VWI1 586 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 LMBRD2Q68DH5 695 aaPredicted RBP17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 EP400NLQ6ZTU2 488 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 PPFIBP1Q86W92 1011 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 PIK3R5Q8WYR1 880 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 ZNF516Q92618 1163 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 SLC35C1Q96A29 364 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 TUBGCP2Q9BSJ2 902 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 INTS13Q9NVM9 706 aa17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 LIMA1Q9UHB6 759 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-223ENST00000584472 VWA8A3KMH1 1905 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 LINC01565O15544 149 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 C1RP00736 705 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 ADH1AP07327 375 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 CNPP09543 421 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 HOXB8P17481 243 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 SSTR3P32745 418 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 AP3M2P53677 418 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 PPP3CAQ08209 521 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 KRT31Q15323 416 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 MAN2A1Q16706 1144 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 DUOXA2Q1HG44 320 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 TMEM31Q5JXX7 168 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 RTP2Q5QGT7 225 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 VN1R2Q8NFZ6 395 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 OR5B17Q8NGF7 314 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 RIN2Q8WYP3 895 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 FAM84AQ96KN4 292 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 B3GALT6Q96L58 329 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 EPHX3Q9H6B9 360 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 FNIP2Q9P278 1114 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 NUB1Q9Y5A7 615 aa17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.21■□□□□ 0.35
CSNK1D-223ENST00000584472 ANO9A1A5B4 782 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 LRRC10BA6NIK2 292 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 C2CD2LO14523 706 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 STX10O60499 249 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 C4BPAP04003 597 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 TMEM191BP0C7N4 346 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 IGFBP6P24592 240 aaPredicted RBP17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 GTF2H1P32780 548 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 AARSP49588 968 aaKnown RBP eCLIP17.2■□□□□ 0.345e-7■■■■■ 34.9
CSNK1D-223ENST00000584472 TFAMQ00059 246 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 KCNH2Q12809 1159 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 C15orf39Q6ZRI6 1047 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 APTXQ7Z2E3 356 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 CACTINQ8WUQ7 758 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 CASP10Q92851 521 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 ANKRD36BP1Q96IX9 119 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 SUSD3Q96L08 255 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 KLHL5Q96PQ7 755 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 MTMR12Q9C0I1 747 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 DPP3Q9NY33 737 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 TAB2Q9NYJ8 693 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 HCFC2Q9Y5Z7 792 aa17.2■□□□□ 0.34
CSNK1D-223ENST00000584472 SYN3O14994 580 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 TEX28O15482 410 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 DCXO43602 365 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 TNNC2P02585 160 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 AFPP02771 609 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 COL9A1P20849 921 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 KLRC2P26717 231 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 BRCC3P46736 316 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 GCLMP48507 274 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 GUCY2FP51841 1108 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 COPB1P53618 953 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 CBX2Q14781 532 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 PSMD5Q16401 504 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 ZACNQ401N2 412 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 CBWD6Q4V339 395 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 CBWD3Q5JTY5 395 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 MIIPQ5JXC2 388 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 CBWD5Q5RIA9 395 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 C9orf57Q5W0N0 161 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 SV2AQ7L0J3 742 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 TRAPPC11Q7Z392 1133 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 CEP57Q86XR8 500 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 TMEM130Q8N3G9 435 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 SLC22A17Q8WUG5 538 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 SUSD6Q92537 303 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 KHSRPQ92945 711 aaKnown RBP eCLIP17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 VPS16Q9H269 839 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 MMRN2Q9H8L6 949 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 TMEM8AQ9HCN3 771 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 DZANK1Q9NVP4 752 aa17.19■□□□□ 0.34
CSNK1D-223ENST00000584472 PRR33A8MZF0 331 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 I3L4J1 428 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 PIRO00625 290 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 TKTP29401 623 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 FMO5P49326 533 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms